ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: H3 histone, family 3B (H3.3B)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132475 H3F3B 9606 - 17:75776434-75785893 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254810 H3F3B-001 75776434-75779779 protein_coding
  ENST00000586270 H3F3B-006 75778610-75779603 protein_coding
  ENST00000586518 H3F3B-012 75778072-75779772 retained_intron
  ENST00000586607 H3F3B-003 75778576-75785486 protein_coding
  ENST00000587171 H3F3B-009 75778638-75779778 protein_coding
  ENST00000587560 H3F3B-007 75778567-75779286 protein_coding
  ENST00000589417 H3F3B-004 75778647-75779779 retained_intron
  ENST00000589599 H3F3B-005 75778574-75779780 protein_coding
  ENST00000589949 H3F3B-008 75778453-75779766 retained_intron
  ENST00000591890 H3F3B-011 75778325-75779759 protein_coding
  ENST00000591893 H3F3B-013 75783107-75785893 retained_intron
  ENST00000592643 H3F3B-010 75778250-75779758 protein_coding
  ENST00000593254 H3F3B-002 75778020-75779778 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000254810ENST00000586270ENST00000586518ENST00000587171ENST00000587560ENST00000589417ENST00000589599ENST00000591890ENST00000592643ENST00000593254
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000254810 37.189±7.95 38.794±10.13 81.579±0.00 72.207±0.00 38.331±18.24
ENST00000586270 175.326±1.99 N/A N/A N/A 217.602±62.15
ENST00000586518 N/A N/A N/A N/A 3.694±0.00
ENST00000587171 N/A N/A N/A N/A 93.445±0.00
ENST00000587560 N/A N/A N/A N/A 37.571±25.38
ENST00000589417 N/A N/A N/A N/A 115.752±12.60
ENST00000589599 134.306±0.00 106.627±18.58 N/A N/A 203.113±87.89
ENST00000591890 N/A N/A N/A N/A 103.465±14.08
ENST00000592643 138.863±0.57 70.921±18.78 N/A N/A 112.045±27.35
ENST00000593254 50.197±0.00 131.333±14.93 N/A 160.104±0.00 101.550±51.84

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00078Q CIL_00078Q_0001 CGP
CIL_00078R CIL_00078R_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000786 IEA nucleosome
GO:0000788 IDA nuclear nucleosome
GO:0000979 IDA RNA polymerase II core promoter sequence-specific DNA binding
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IEA:IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0007596 TAS blood coagulation
GO:0030307 IMP positive regulation of cell growth
GO:0031492 IDA nucleosomal DNA binding
GO:0043234 IDA protein complex
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020504 h3f3a protein_coding Danio_rerio
ENSMUSG00000016559 H3f3b protein_coding Mus_musculus

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