ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: src kinase associated phosphoprotein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141293 SKAP1 9606 - 17:48133440-48430275 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336915 SKAP1-001 48133440-48430190 protein_coding
  ENST00000579336 SKAP1-005 48180092-48185179 protein_coding
  ENST00000579476 SKAP1-007 48133446-48162670 retained_intron
  ENST00000581400 SKAP1-006 48137229-48346005 nonsense_mediated_decay
  ENST00000581419 SKAP1-004 48180108-48345965 nonsense_mediated_decay
  ENST00000583844 SKAP1-008 48133446-48137334 nonsense_mediated_decay
  ENST00000584709 SKAP1-003 48133445-48430275 nonsense_mediated_decay
  ENST00000584924 SKAP1-002 48136938-48430219 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000336915ENST00000579336ENST00000579476ENST00000581400ENST00000581419ENST00000583844ENST00000584709ENST00000584924
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000336915 N/A 0.088±0.02 N/A N/A 0.116±0.06
ENST00000579336 N/A 0.142±0.08 N/A N/A N/A
ENST00000579476 N/A 0.091±0.03 1.368±0.00 N/A 0.237±0.16
ENST00000581400 N/A N/A 0.263±0.00 N/A 0.191±0.14
ENST00000581419 N/A 0.063±0.00 0.272±0.00 N/A 0.214±0.17
ENST00000583844 N/A 0.135±0.04 0.755±0.00 0.332±0.00 0.069±0.00
ENST00000584709 N/A 0.057±0.00 N/A N/A 0.067±0.00
ENST00000584924 0.032±0.00 0.116±0.04 N/A N/A 0.092±0.04

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007RQ CIL_0007RQ_0001 VISTA
CIL_0007WA CIL_0007WA_0001 VISTA
CIL_00097B CIL_00097B_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005070 IC SH3/SH2 adaptor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005911 IEA cell-cell junction
GO:0009967 IC positive regulation of signal transduction
GO:0017124 TAS SH3 domain binding
GO:0019901 IPI protein kinase binding
GO:0019903 IPI protein phosphatase binding
GO:0032403 IEA protein complex binding
GO:0042169 IDA SH2 domain binding
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0050852 IMP T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001498 skap1 protein_coding Danio_rerio
ENSMUSG00000057058 Skap1 protein_coding Mus_musculus

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