Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_genes' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_genes' to File cache [CORE/Cake/Cache/Cache.php, line 323]
ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RAB40B, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141542 RAB40B 9606 - 17:82654973-82698728 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269347 RAB40B-002 82657067-82698687 protein_coding
  ENST00000538809 RAB40B-005 82657911-82698662 protein_coding
  ENST00000570676 RAB40B-008 82657793-82664895 retained_intron
  ENST00000571554 RAB40B-007 82661011-82696870 processed_transcript
  ENST00000571880 RAB40B-012 82655037-82656881 processed_transcript
  ENST00000571995 RAB40B-001 82654973-82698728 protein_coding
  ENST00000572603 RAB40B-006 82661081-82698654 processed_transcript
  ENST00000573395 RAB40B-011 82657977-82658849 retained_intron
  ENST00000574132 RAB40B-009 82657706-82659759 retained_intron
  ENST00000576148 RAB40B-010 82657915-82661031 protein_coding
  ENST00000576359 RAB40B-003 82657068-82659589 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000269347ENST00000538809ENST00000570676ENST00000571995ENST00000574132ENST00000576148ENST00000576359
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000269347 2.204±0.00 3.698±1.85 3.420±0.00 1.353±0.00 1.278±0.83
ENST00000538809 2.689±0.00 4.183±1.85 N/A 4.116±0.00 1.825±0.99
ENST00000570676 N/A N/A N/A N/A 0.109±0.00
ENST00000571995 0.600±0.25 0.464±0.29 N/A N/A 0.338±0.16
ENST00000574132 N/A N/A N/A N/A 1.967±0.68
ENST00000576148 N/A N/A N/A 9.522±0.00 N/A
ENST00000576359 N/A N/A N/A 0.724±0.00 0.159±0.12

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000IW CIL_0000IW_0001 CGP
CIL_0000IX CIL_0000IX_0001 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042410 rab40b protein_coding Danio_rerio
ENSMUSG00000025170 Rab40b protein_coding Mus_musculus

Loading

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]