ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: nuclear prelamin A recognition factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141562 NARF 9606 + 17:82458180-82490537 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309794 NARF-001 82458606-82490537 protein_coding
  ENST00000345415 NARF-007 82458649-82488262 protein_coding
  ENST00000374611 NARF-004 82458697-82488263 nonsense_mediated_decay
  ENST00000390006 NARF-006 82458185-82488255 protein_coding
  ENST00000412079 NARF-201 82458664-82488265 protein_coding
  ENST00000457415 NARF-018 82458703-82488215 protein_coding
  ENST00000577410 NARF-016 82458875-82481093 protein_coding
  ENST00000577432 NARF-020 82458724-82484900 protein_coding
  ENST00000577812 NARF-008 82458712-82488259 retained_intron
  ENST00000578082 NARF-021 82458746-82479206 retained_intron
  ENST00000578820 NARF-024 82484808-82488259 retained_intron
  ENST00000579083 NARF-017 82468499-82478827 retained_intron
  ENST00000579198 NARF-010 82458180-82468799 protein_coding
  ENST00000580296 NARF-013 82458359-82472614 protein_coding
  ENST00000580748 NARF-015 82458754-82468787 nonsense_mediated_decay
  ENST00000581202 NARF-005 82458664-82483816 nonsense_mediated_decay
  ENST00000581743 NARF-025 82458714-82479993 processed_transcript
  ENST00000581795 NARF-003 82458711-82484321 nonsense_mediated_decay
  ENST00000582585 NARF-002 82458698-82461014 nonsense_mediated_decay
  ENST00000582907 NARF-019 82458726-82488065 nonsense_mediated_decay
  ENST00000583181 NARF-011 82458194-82468863 processed_transcript
  ENST00000583908 NARF-023 82484539-82488258 retained_intron
  ENST00000584192 NARF-012 82458228-82468896 processed_transcript
  ENST00000584411 NARF-014 82458711-82472618 protein_coding
  ENST00000584445 NARF-009 82480468-82488262 retained_intron
  ENST00000584513 NARF-022 82481081-82488062 protein_coding
  ENST00000584965 NARF-026 82480999-82488261 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000309794ENST00000345415ENST00000374611ENST00000390006ENST00000412079ENST00000457415ENST00000577432ENST00000577812ENST00000578820ENST00000581743ENST00000582907ENST00000584411ENST00000584445
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000309794 N/A 4.923±2.87 5.593±0.00 N/A 3.243±1.07
ENST00000345415 27.035±1.80 20.690±11.82 N/A 8.118±0.00 14.246±6.16
ENST00000374611 N/A N/A N/A N/A 11.949±4.16
ENST00000390006 N/A 2.040±0.64 N/A N/A 10.196±6.96
ENST00000412079 N/A N/A N/A N/A 11.228±3.23
ENST00000457415 N/A N/A N/A N/A 7.924±0.00
ENST00000577432 N/A 30.107±0.00 N/A 11.113±0.00 N/A
ENST00000577812 N/A 0.991±0.00 N/A N/A 8.890±10.31
ENST00000578820 116.417±9.72 50.670±18.39 85.187±0.00 12.669±0.00 17.172±0.00
ENST00000581743 N/A 21.713±12.38 N/A 11.098±0.00 22.382±11.86
ENST00000582907 N/A 14.073±2.30 N/A 5.768±0.00 9.328±1.63
ENST00000584411 N/A 54.394±17.02 N/A N/A 25.306±2.06
ENST00000584445 N/A N/A 10.311±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00043T CIL_00043T_0002 CGP
CIL_00054L CIL_00054L_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005521 IPI lamin binding
GO:0005634 IDA nucleus
GO:0005638 IDA lamin filament
GO:0005652 TAS nuclear lamina
GO:0031981 IDA nuclear lumen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024184 narf protein_coding Danio_rerio
ENSMUSG00000000056 Narf protein_coding Mus_musculus

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