ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: thioredoxin-like 4A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141759 TXNL4A 9606 - 18:79970811-80033949 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269601 TXNL4A-001 79970811-79988593 protein_coding
  ENST00000355491 TXNL4A-008 79973525-79988536 nonsense_mediated_decay
  ENST00000585474 TXNL4A-002 79972875-80033949 protein_coding
  ENST00000585769 TXNL4A-003 79973534-79988581 nonsense_mediated_decay
  ENST00000586295 TXNL4A-005 79977602-79988537 nonsense_mediated_decay
  ENST00000586612 TXNL4A-011 79973542-79986734 processed_transcript
  ENST00000586825 TXNL4A-009 79977598-79988502 nonsense_mediated_decay
  ENST00000588162 TXNL4A-010 79973407-79988541 protein_coding
  ENST00000589926 TXNL4A-006 79994943-80033894 processed_transcript
  ENST00000591711 TXNL4A-007 79977331-79988537 protein_coding
  ENST00000592837 TXNL4A-012 79973566-79977917 protein_coding
  ENST00000592957 TXNL4A-004 79973513-80033891 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000269601ENST00000355491ENST00000585474ENST00000585769ENST00000586825ENST00000588162ENST00000592837ENST00000592957
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000269601 N/A 2.955±0.44 N/A 2.336±0.00 3.862±3.45
ENST00000355491 82.347±11.13 29.704±5.46 N/A 29.011±0.00 22.788±8.96
ENST00000585474 N/A N/A N/A N/A 6.807±0.85
ENST00000585769 N/A N/A N/A N/A 10.109±1.91
ENST00000586825 N/A N/A N/A N/A 1.270±0.00
ENST00000588162 123.734±0.04 39.756±13.03 21.546±0.00 20.362±0.00 16.390±7.63
ENST00000592837 N/A N/A N/A N/A 9.408±1.74
ENST00000592957 144.163±14.76 99.242±27.50 31.525±0.00 27.123±0.00 48.391±23.62

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007Y9 CIL_0007Y9_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000245 TAS spliceosomal complex assembly
GO:0000375 TAS RNA splicing, via transesterification reactions
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005681 IEA:TAS spliceosomal complex
GO:0005737 IDA cytoplasm
GO:0007067 IEA mitotic nuclear division
GO:0008380 TAS RNA splicing
GO:0010467 TAS gene expression
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036190 txnl4a protein_coding Danio_rerio
ENSMUSG00000057130 Txnl4a protein_coding Mus_musculus

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