ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: nuclear factor I/C (CCAAT-binding transcription factor)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141905 NFIC 9606 + 19:3359563-3469217 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341919 NFIC-004 3366549-3462967 protein_coding
  ENST00000395111 NFIC-003 3359647-3463142 protein_coding
  ENST00000443272 NFIC-006 3366586-3462907 protein_coding
  ENST00000586919 NFIC-011 3359683-3456600 protein_coding
  ENST00000588839 NFIC-007 3410596-3425147 processed_transcript
  ENST00000589123 NFIC-001 3359563-3469217 protein_coding
  ENST00000589164 NFIC-009 3452579-3457989 processed_transcript
  ENST00000589537 NFIC-010 3435046-3463255 retained_intron
  ENST00000589969 NFIC-008 3452641-3454350 retained_intron
  ENST00000590282 NFIC-005 3366583-3462900 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHMVEC-DHUVECENST00000341919ENST00000395111ENST00000589123ENST00000590282
Transcript ID HAoEC HHSEC HMVEC-D HUVEC
ENST00000341919 4.899±0.00 N/A 6.648±0.00 6.810±6.77
ENST00000395111 8.416±5.33 N/A N/A 14.651±0.88
ENST00000589123 3.421±3.54 1.623±0.00 2.114±0.00 7.576±9.39
ENST00000590282 5.243±0.18 N/A N/A 4.930±6.24

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001159 IEA core promoter proximal region DNA binding
GO:0003677 IEA DNA binding
GO:0003690 IEA double-stranded DNA binding
GO:0003700 IDA:IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005730 IDA nucleolus
GO:0006260 IEA DNA replication
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007179 IEA transforming growth factor beta receptor signaling pathway
GO:0042475 IEA odontogenesis of dentin-containing tooth
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043210 nfic protein_coding Danio_rerio
ENSMUSG00000055053 Nfic protein_coding Mus_musculus

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