ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: synaptotagmin-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000142765 SYTL1 9606 + 1:27342020-27353937 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318074 SYTL1-001 27342022-27353932 protein_coding
  ENST00000473280 SYTL1-008 27343228-27347458 protein_coding
  ENST00000475199 SYTL1-005 27351472-27353930 retained_intron
  ENST00000483926 SYTL1-003 27342057-27353930 retained_intron
  ENST00000485269 SYTL1-007 27349747-27351579 retained_intron
  ENST00000490170 SYTL1-004 27347544-27353930 retained_intron
  ENST00000496001 SYTL1-006 27349476-27351545 retained_intron
  ENST00000543823 SYTL1-010 27344873-27353930 protein_coding
  ENST00000615284 SYTL1-011 27351075-27353937 retained_intron
  ENST00000616558 SYTL1-009 27342041-27353893 protein_coding
  ENST00000618673 SYTL1-012 27342020-27353901 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000318074ENST00000473280ENST00000475199ENST00000483926ENST00000485269ENST00000490170ENST00000496001ENST00000543823ENST00000615284ENST00000616558ENST00000618673
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000318074 N/A 0.369±0.16 0.491±0.00 N/A N/A
ENST00000473280 N/A 1.373±0.00 N/A N/A N/A
ENST00000475199 0.045±0.02 0.084±0.05 0.772±0.00 0.083±0.00 0.183±0.19
ENST00000483926 N/A 0.093±0.00 N/A N/A 0.029±0.00
ENST00000485269 0.064±0.00 0.271±0.04 1.110±0.00 N/A 0.075±0.03
ENST00000490170 0.117±0.00 0.212±0.00 N/A N/A 0.039±0.03
ENST00000496001 N/A N/A N/A 0.238±0.00 0.066±0.02
ENST00000543823 N/A 0.150±0.00 N/A N/A 0.028±0.01
ENST00000615284 0.135±0.00 0.207±0.16 N/A 0.440±0.00 0.247±0.28
ENST00000616558 N/A 0.619±0.22 N/A N/A 0.037±0.01
ENST00000618673 N/A 0.140±0.17 N/A N/A 0.128±0.08

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008WN CIL_0008WN_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005886 IDA plasma membrane
GO:0006886 IEA intracellular protein transport
GO:0006887 IEA:IDA exocytosis
GO:0016020 IEA membrane
GO:0017137 IEA Rab GTPase binding
GO:0019897 ISS extrinsic component of plasma membrane
GO:0042043 ISS neurexin family protein binding
GO:0042470 ISS melanosome
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070094 sytl1 protein_coding Danio_rerio
ENSMUSG00000028860 Sytl1 protein_coding Mus_musculus

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