| Transcript ID | BECs | HAoEC | HHSEC | HMVEC-D | HUVEC |
|---|---|---|---|---|---|
| ENST00000323853 | 2.228±0.03 | 41.111±16.33 | N/A | 31.875±0.00 | 15.952±9.54 |
| ENST00000497539 | 15.985±0.00 | 18.457±4.13 | 30.410±0.00 | N/A | 30.471±14.64 |
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | small nuclear ribonucleoprotein 200kDa (U5) | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
|
ENSG00000144028 |
SNRNP200 | 9606 | - |
2:96274336-96305515 |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000323853 |
SNRNP200-001 | 96274336-96305515 | protein_coding | ||
| ENST00000429650 |
SNRNP200-006 | 96275017-96285376 | nonsense_mediated_decay | ||
| ENST00000480242 |
SNRNP200-004 | 96281185-96284874 | retained_intron | ||
| ENST00000480615 |
SNRNP200-003 | 96284815-96289855 | retained_intron | ||
| ENST00000480835 |
SNRNP200-009 | 96277534-96278359 | retained_intron | ||
| ENST00000484372 |
SNRNP200-008 | 96278678-96279807 | retained_intron | ||
| ENST00000493271 |
SNRNP200-007 | 96279187-96282025 | retained_intron | ||
| ENST00000497539 |
SNRNP200-005 | 96274731-96284723 | retained_intron | ||
Expression Patterns
|
Conserved Regions |
|---|
| Not located within a conserved region. |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000354 | IC | cis assembly of pre-catalytic spliceosome |
| GO:0000398 | IC | mRNA splicing, via spliceosome |
| GO:0001649 | IDA | osteoblast differentiation |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003677 | IEA | DNA binding |
| GO:0004004 | IDA | ATP-dependent RNA helicase activity |
| GO:0004386 | IEA | helicase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005524 | IEA | ATP binding |
| GO:0005634 | IDA | nucleus |
| GO:0005654 | TAS | nucleoplasm |
| GO:0005681 | IDA | spliceosomal complex |
| GO:0005682 | IDA | U5 snRNP |
| GO:0006200 | IDA | ATP catabolic process |
| GO:0008026 | IDA | ATP-dependent helicase activity |
| GO:0008152 | IEA | metabolic process |
| GO:0008380 | TAS | RNA splicing |
| GO:0010467 | TAS | gene expression |
| GO:0016020 | IDA | membrane |
| GO:0016787 | IEA | hydrolase activity |
| GO:0019013 | IEA | viral nucleocapsid |
| GO:0030529 | IEA | ribonucleoprotein complex |
| GO:0042802 | IPI | identical protein binding |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0071013 | IDA | catalytic step 2 spliceosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000077536
|
snrnp200 | protein_coding | Danio_rerio | ||
|
ENSMUSG00000003660
|
Snrnp200 | protein_coding | Mus_musculus | ||