ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: solute carrier family 4, sodium bicarbonate transporter, member 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144290 SLC4A10 9606 + 2:161424332-161985282 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272716 SLC4A10-009 161624426-161983245 protein_coding
  ENST00000375514 SLC4A10-201 161624335-161985275 protein_coding
  ENST00000415876 SLC4A10-001 161624338-161985282 protein_coding
  ENST00000421911 SLC4A10-010 161624461-161983359 protein_coding
  ENST00000446228 SLC4A10-005 161624461-161983359 nonsense_mediated_decay
  ENST00000446997 SLC4A10-004 161624426-161985253 protein_coding
  ENST00000461456 SLC4A10-003 161624418-161873921 processed_transcript
  ENST00000481721 SLC4A10-006 161624435-161839876 processed_transcript
  ENST00000482861 SLC4A10-007 161424332-161771035 processed_transcript
  ENST00000493021 SLC4A10-002 161624400-161901160 processed_transcript
  ENST00000605990 SLC4A10-008 161424373-161624566 processed_transcript
  ENST00000606386 SLC4A10-011 161427453-161651290 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHUVECENST00000272716ENST00000415876ENST00000421911ENST00000446228ENST00000446997ENST00000482861ENST00000605990ENST00000606386
Transcript ID BECs HAoEC HUVEC
ENST00000272716 N/A 0.005±0.00 0.015±0.01
ENST00000415876 N/A 0.005±0.00 0.010±0.00
ENST00000421911 N/A 0.010±0.00 0.009±0.01
ENST00000446228 N/A N/A 0.021±0.00
ENST00000446997 N/A 0.007±0.00 0.012±0.01
ENST00000482861 N/A 0.059±0.02 0.066±0.00
ENST00000605990 0.068±0.00 N/A N/A
ENST00000606386 N/A 0.107±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008JH CIL_0008JH_0001 VISTA
CIL_0005L1 CIL_0005L1_0001 CGP
CIL_0003AH CIL_0003AH_0001 CGP
CIL_0005KV CIL_0005KV_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005452 IEA inorganic anion exchanger activity
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006811 TAS ion transport
GO:0006814 IEA sodium ion transport
GO:0006820 IEA anion transport
GO:0006821 NAS chloride transport
GO:0006885 IEA regulation of pH
GO:0008509 IEA anion transmembrane transporter activity
GO:0015293 IEA symporter activity
GO:0015301 IEA anion:anion antiporter activity
GO:0015701 NAS bicarbonate transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060303 slc4a10b protein_coding Danio_rerio
ENSDARG00000063133 slc4a10a protein_coding Danio_rerio
ENSMUSG00000026904 Slc4a10 protein_coding Mus_musculus

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