ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145833 DDX46 9606 + 5:134758779-134855133 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354283 DDX46-002 134758804-134829296 protein_coding
  ENST00000452510 DDX46-001 134758781-134831138 protein_coding
  ENST00000503946 DDX46-003 134790153-134829932 retained_intron
  ENST00000505592 DDX46-010 134781141-134784693 retained_intron
  ENST00000506332 DDX46-004 134825813-134829039 retained_intron
  ENST00000507053 DDX46-006 134818916-134855133 nonsense_mediated_decay
  ENST00000507392 DDX46-005 134758779-134829039 nonsense_mediated_decay
  ENST00000509178 DDX46-011 134782070-134794968 processed_transcript
  ENST00000509255 DDX46-007 134773785-134777894 retained_intron
  ENST00000513592 DDX46-009 134782051-134794924 nonsense_mediated_decay
  ENST00000513987 DDX46-008 134780736-134781952 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000354283ENST00000452510ENST00000507392
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000354283 4.154±0.40 8.451±3.51 5.799±0.00 9.142±0.00 8.968±4.58
ENST00000452510 N/A 3.681±0.22 N/A N/A 1.971±0.88
ENST00000507392 N/A 6.307±2.09 N/A 4.316±0.00 4.950±2.02

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007JT CIL_0007JT_0002 UCNEbase
CIL_0009AP CIL_0009AP_0001 VISTA
CIL_0005XR CIL_0005XR_0001 CGP
CIL_0005XQ CIL_0005XQ_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006200 IEA ATP catabolic process
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000021500 Ddx46 protein_coding Mus_musculus

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