ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: nuclear RNA export factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147206 NXF3 9606 - X:103075810-103093125 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000395065 NXF3-001 103075810-103093125 protein_coding
  ENST00000427570 NXF3-002 103077735-103083672 protein_coding
  ENST00000460791 NXF3-004 103082096-103083480 retained_intron
  ENST00000468528 NXF3-007 103076276-103079727 retained_intron
  ENST00000470724 NXF3-008 103077675-103080148 retained_intron
  ENST00000494300 NXF3-006 103079383-103080734 retained_intron
  ENST00000497850 NXF3-003 103075824-103081735 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000395065ENST00000427570ENST00000460791ENST00000468528ENST00000470724ENST00000494300ENST00000497850
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000395065 N/A 0.032±0.00 N/A N/A
ENST00000427570 N/A 0.091±0.00 N/A N/A
ENST00000460791 N/A 0.111±0.05 N/A 0.085±0.00
ENST00000468528 0.127±0.00 0.174±0.00 N/A N/A
ENST00000470724 N/A 0.128±0.00 N/A 0.157±0.00
ENST00000494300 N/A N/A 1.676±0.00 N/A
ENST00000497850 N/A 0.034±0.00 N/A 0.004±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00037I CIL_00037I_0001 CGP
CIL_000376 CIL_000376_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0003729 IEA mRNA binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0006406 IDA:IEA mRNA export from nucleus
GO:0006810 IEA transport
GO:0016973 IEA poly(A)+ mRNA export from nucleus
GO:0042272 IDA nuclear RNA export factor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055076 nxf1 protein_coding Danio_rerio
ENSDARG00000086017 zgc:153681 protein_coding Danio_rerio
ENSMUSG00000057000 Nxf3 protein_coding Mus_musculus

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