ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: homeobox containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147421 HMBOX1 9606 + 8:28890394-29064764 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000287701 HMBOX1-002 28890394-29052734 protein_coding
  ENST00000355231 HMBOX1-017 28891316-29051898 protein_coding
  ENST00000397358 HMBOX1-001 28890404-29053270 protein_coding
  ENST00000403668 HMBOX1-201 28890708-29049385 protein_coding
  ENST00000517386 HMBOX1-010 29046300-29050654 processed_transcript
  ENST00000518080 HMBOX1-009 28970436-29018899 processed_transcript
  ENST00000519047 HMBOX1-005 28890625-29051870 protein_coding
  ENST00000519662 HMBOX1-008 28890395-28970373 protein_coding
  ENST00000521516 HMBOX1-004 28890625-29051917 nonsense_mediated_decay
  ENST00000522468 HMBOX1-012 29051018-29064764 nonsense_mediated_decay
  ENST00000523613 HMBOX1-003 28890404-29049321 protein_coding
  ENST00000524238 HMBOX1-006 28963863-29051549 protein_coding
  ENST00000558662 HMBOX1-014 28890395-29049591 protein_coding
  ENST00000560269 HMBOX1-011 28890924-28970435 processed_transcript
  ENST00000560357 HMBOX1-016 28890410-28970672 retained_intron
  ENST00000560599 HMBOX1-015 28890404-29049354 protein_coding
  ENST00000561377 HMBOX1-013 29052517-29053759 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000287701ENST00000397358ENST00000519047ENST00000521516ENST00000522468ENST00000560357
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000287701 0.580±0.00 0.337±0.00 N/A 1.240±0.00 1.639±0.53
ENST00000397358 N/A 0.630±0.41 N/A N/A 4.348±2.11
ENST00000519047 N/A 1.469±0.03 N/A N/A N/A
ENST00000521516 N/A 0.924±0.29 N/A N/A 2.709±0.00
ENST00000522468 7.950±0.00 1.799±0.51 41.311±0.00 3.852±0.00 N/A
ENST00000560357 N/A N/A N/A N/A 7.587±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003YV CIL_0003YV_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018913 hmbox1b protein_coding Danio_rerio
ENSDARG00000027082 hmbox1a protein_coding Danio_rerio
ENSMUSG00000021972 Hmbox1 protein_coding Mus_musculus

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