ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: tripartite motif containing 55
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147573 TRIM55 9606 + 8:66126896-66175487 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000276573 TRIM55-004 66127043-66174592 protein_coding
  ENST00000315962 TRIM55-001 66126896-66175487 protein_coding
  ENST00000350034 TRIM55-003 66127043-66174818 protein_coding
  ENST00000353317 TRIM55-002 66126896-66175485 protein_coding
  ENST00000517647 TRIM55-006 66152298-66175005 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHUVECENST00000276573ENST00000350034ENST00000353317ENST00000517647
Transcript ID HAoEC HHSEC HUVEC
ENST00000276573 0.033±0.01 N/A 0.019±0.00
ENST00000350034 N/A 0.093±0.00 0.045±0.01
ENST00000353317 0.018±0.00 N/A 0.010±0.00
ENST00000517647 0.048±0.01 0.071±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007DP CIL_0007DP_0002 CGP
CIL_0005BV CIL_0005BV_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 NAS signal transducer activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 NAS microtubule
GO:0007165 NAS signal transduction
GO:0008270 IEA zinc ion binding
GO:0042802 IPI identical protein binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029596 trim55a protein_coding Danio_rerio
ENSDARG00000058158 trim55b protein_coding Danio_rerio
ENSMUSG00000060913 Trim55 protein_coding Mus_musculus

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