ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ribonuclease P/MRP 30kDa subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148688 RPP30 9606 + 10:90871716-90908553 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000277882 RPP30-004 90871983-90896392 protein_coding
  ENST00000371703 RPP30-001 90871716-90902190 protein_coding
  ENST00000413330 RPP30-201 90871952-90903262 protein_coding
  ENST00000414836 RPP30-006 90875558-90900766 protein_coding
  ENST00000466462 RPP30-007 90875604-90900847 processed_transcript
  ENST00000470933 RPP30-009 90896326-90908553 processed_transcript
  ENST00000479678 RPP30-010 90895668-90900766 processed_transcript
  ENST00000480406 RPP30-008 90894773-90905638 processed_transcript
  ENST00000487998 RPP30-005 90871973-90900762 retained_intron
  ENST00000489806 RPP30-003 90894775-90906065 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000277882ENST00000371703ENST00000413330ENST00000414836ENST00000466462ENST00000479678ENST00000480406ENST00000487998ENST00000489806
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000277882 N/A 7.314±1.97 N/A N/A 10.811±0.00
ENST00000371703 N/A 1.747±0.44 1.248±0.00 N/A 1.684±0.96
ENST00000413330 8.411±2.33 10.992±2.39 N/A 14.770±0.00 11.992±6.54
ENST00000414836 10.921±3.60 6.309±0.07 9.305±0.00 N/A 7.440±3.62
ENST00000466462 9.187±0.00 12.205±2.36 N/A 9.781±0.00 10.271±1.69
ENST00000479678 45.662±10.58 N/A 13.872±0.00 N/A N/A
ENST00000480406 8.589±0.00 N/A N/A N/A N/A
ENST00000487998 N/A 1.742±0.00 2.587±0.00 N/A 3.064±1.49
ENST00000489806 N/A 3.971±0.89 3.471±0.00 3.162±0.00 1.565±0.79

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008BY CIL_0008BY_0001 VISTA
CIL_0005UK CIL_0005UK_0001 CGP
CIL_0001IP CIL_0001IP_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004526 IEA ribonuclease P activity
GO:0004540 IEA ribonuclease activity
GO:0005634 TAS nucleus
GO:0005655 TAS nucleolar ribonuclease P complex
GO:0008033 IEA tRNA processing
GO:0044822 IDA poly(A) RNA binding
GO:0090501 IEA RNA phosphodiester bond hydrolysis
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027428 rpp30 protein_coding Danio_rerio
ENSMUSG00000024800 Rpp30 protein_coding Mus_musculus

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