ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SEC24 family member D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000150961 SEC24D 9606 - 4:118722823-118838683 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000280551 SEC24D-001 118722823-118836138 protein_coding
  ENST00000419654 SEC24D-201 118736552-118836171 protein_coding
  ENST00000502526 SEC24D-015 118738104-118739223 retained_intron
  ENST00000502830 SEC24D-014 118723521-118728847 retained_intron
  ENST00000503683 SEC24D-008 118815627-118836614 protein_coding
  ENST00000505134 SEC24D-006 118722830-118766563 processed_transcript
  ENST00000505280 SEC24D-010 118833277-118838653 processed_transcript
  ENST00000506622 SEC24D-005 118797683-118838683 nonsense_mediated_decay
  ENST00000509818 SEC24D-004 118752746-118838672 nonsense_mediated_decay
  ENST00000511033 SEC24D-013 118744074-118754120 processed_transcript
  ENST00000511481 SEC24D-002 118723024-118769840 protein_coding
  ENST00000511715 SEC24D-007 118729122-118733315 retained_intron
  ENST00000514418 SEC24D-012 118764413-118768247 retained_intron
  ENST00000514561 SEC24D-003 118736029-118838670 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000280551ENST00000419654ENST00000505134ENST00000511481
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000280551 1.071±0.00 13.383±4.83 N/A 23.301±0.00 19.907±8.85
ENST00000419654 N/A 6.558±1.87 N/A 9.163±0.00 6.686±3.00
ENST00000505134 0.533±0.00 N/A 1.025±0.00 N/A N/A
ENST00000511481 N/A 13.256±6.41 N/A 9.869±0.00 9.537±3.39

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001701 IEA in utero embryonic development
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 ND molecular_function
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006888 IEA:NAS ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 IEA:NAS COPII vesicle coat
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0048208 TAS COPII vesicle coating
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045946 sec24d protein_coding Danio_rerio
ENSMUSG00000039234 Sec24d protein_coding Mus_musculus

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