ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RNA binding motif, single stranded interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153250 RBMS1 9606 - 2:160272151-160493794 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000348849 RBMS1-001 160272151-160493794 protein_coding
  ENST00000392753 RBMS1-201 160272152-160367526 protein_coding
  ENST00000409075 RBMS1-006 160274460-160408609 protein_coding
  ENST00000409289 RBMS1-009 160274460-160416178 protein_coding
  ENST00000409972 RBMS1-007 160274520-160407889 protein_coding
  ENST00000428519 RBMS1-015 160303408-160416178 protein_coding
  ENST00000464200 RBMS1-011 160275399-160277372 retained_intron
  ENST00000474147 RBMS1-003 160274460-160279766 retained_intron
  ENST00000474820 RBMS1-002 160272151-160493379 processed_transcript
  ENST00000475103 RBMS1-010 160274480-160276685 processed_transcript
  ENST00000477486 RBMS1-014 160366913-160492969 retained_intron
  ENST00000477965 RBMS1-004 160274540-160283100 retained_intron
  ENST00000490637 RBMS1-008 160274518-160284867 retained_intron
  ENST00000491781 RBMS1-005 160284261-160493482 retained_intron
  ENST00000492283 RBMS1-012 160302504-160318203 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHUVECENST00000348849ENST00000392753ENST00000409075ENST00000409289ENST00000409972ENST00000474147ENST00000474820ENST00000490637ENST00000491781
Transcript ID HAoEC HUVEC
ENST00000348849 2.688±1.17 4.426±2.39
ENST00000392753 6.951±6.75 9.927±5.50
ENST00000409075 N/A 10.951±0.01
ENST00000409289 N/A 10.970±2.10
ENST00000409972 N/A 4.312±2.62
ENST00000474147 N/A 5.663±1.50
ENST00000474820 N/A 4.088±2.00
ENST00000490637 N/A 5.987±1.78
ENST00000491781 N/A 4.196±0.51

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005TW CIL_0005TW_0001 CGP
CIL_0005KZ CIL_0005KZ_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003690 NAS double-stranded DNA binding
GO:0003697 NAS single-stranded DNA binding
GO:0003723 NAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 NAS nucleus
GO:0006260 NAS DNA replication
GO:0006396 TAS RNA processing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000026970 Rbms1 protein_coding Mus_musculus

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