ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: zinc finger with KRAB and SCAN domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155592 ZKSCAN2 9606 - 16:25236001-25257931 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328086 ZKSCAN2-001 25236001-25257931 protein_coding
  ENST00000565590 ZKSCAN2-003 25246271-25257534 retained_intron
  ENST00000569150 ZKSCAN2-002 25239494-25257557 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000328086ENST00000565590ENST00000569150
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000328086 0.849±0.18 1.364±0.39 0.434±0.00 1.093±0.00 0.643±0.28
ENST00000565590 N/A N/A N/A N/A 0.451±0.28
ENST00000569150 N/A 0.456±0.16 N/A 0.370±0.00 0.352±0.16

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005KP CIL_0005KP_0001 CGP
CIL_0003X1 CIL_0003X1_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0005634 IBA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094859 si:dkey-11o15.10 protein_coding Danio_rerio
ENSDARG00000097059 si:dkey-159n16.4 protein_coding Danio_rerio
ENSDARG00000097776 ZSCAN20 protein_coding Danio_rerio
ENSMUSG00000030757 Zkscan2 protein_coding Mus_musculus

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