ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RAB11 family interacting protein 1 (class I)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156675 RAB11FIP1 9606 - 8:37858618-37899467 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000287263 RAB11FIP1-001 37858618-37899467 protein_coding
  ENST00000330843 RAB11FIP1-002 37858949-37899454 protein_coding
  ENST00000522727 RAB11FIP1-008 37862759-37899454 protein_coding
  ENST00000522774 RAB11FIP1-007 37862895-37873278 retained_intron
  ENST00000523182 RAB11FIP1-003 37862895-37873278 processed_transcript
  ENST00000524118 RAB11FIP1-006 37870387-37878117 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000287263ENST00000330843ENST00000522727ENST00000522774ENST00000524118
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000287263 0.047±0.00 0.165±0.11 N/A 0.220±0.34
ENST00000330843 0.050±0.00 1.715±1.58 1.221±0.00 0.448±0.41
ENST00000522727 N/A 4.178±4.10 2.241±0.00 0.999±0.92
ENST00000522774 N/A N/A N/A 0.027±0.00
ENST00000524118 0.231±0.08 0.180±0.00 N/A 0.280±0.17

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000802 CIL_000802_0001 VISTA
CIL_0009C5 CIL_0009C5_0001 VISTA
CIL_0007QT CIL_0007QT_0001 VISTA
CIL_0003YX CIL_0003YX_0002 CGP
CIL_0002IQ CIL_0002IQ_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036462 rab11fip1b protein_coding Danio_rerio
ENSDARG00000046124 rab11fip1a protein_coding Danio_rerio
ENSMUSG00000031488 Rab11fip1 protein_coding Mus_musculus

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