ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: retention in endoplasmic reticulum sorting receptor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157916 RER1 9606 + 1:2391775-2405444 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306256 RER1-008 2391843-2403064 protein_coding
  ENST00000378512 RER1-002 2391890-2403751 protein_coding
  ENST00000378513 RER1-201 2391775-2405442 protein_coding
  ENST00000378518 RER1-004 2391828-2402325 protein_coding
  ENST00000443438 RER1-006 2393174-2402316 protein_coding
  ENST00000462129 RER1-007 2401951-2403227 retained_intron
  ENST00000488353 RER1-003 2394005-2403216 protein_coding
  ENST00000493207 RER1-005 2391857-2396367 retained_intron
  ENST00000605895 RER1-001 2391833-2405444 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000306256ENST00000378512ENST00000378513ENST00000378518ENST00000443438ENST00000462129ENST00000488353
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000306256 N/A N/A N/A N/A 43.581±31.87
ENST00000378512 129.406±12.46 80.916±20.43 58.467±0.00 69.510±0.00 31.710±13.82
ENST00000378513 N/A 2.952±0.29 N/A N/A 7.742±0.68
ENST00000378518 N/A 71.757±0.00 N/A N/A 35.361±19.20
ENST00000443438 N/A 27.659±0.00 N/A N/A 73.627±30.02
ENST00000462129 N/A N/A N/A N/A 18.157±0.00
ENST00000488353 N/A 3.460±0.00 N/A N/A 6.253±6.06

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007QV CIL_0007QV_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005793 IEA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IDA Golgi apparatus
GO:0006890 IDA retrograde vesicle-mediated transport, Golgi to ER
GO:0007528 IEA neuromuscular junction development
GO:0009986 IEA cell surface
GO:0016021 IEA integral component of membrane
GO:0030173 IDA integral component of Golgi membrane
GO:0033130 IEA acetylcholine receptor binding
GO:0071340 IEA skeletal muscle acetylcholine-gated channel clustering
GO:0090004 IEA positive regulation of establishment of protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012747 rer1 protein_coding Danio_rerio
ENSMUSG00000029048 Rer1 protein_coding Mus_musculus

Loading