ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: farnesyl diphosphate synthase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160752 FDPS 9606 + 1:155308748-155320666 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356657 FDPS-001 155308916-155320665 protein_coding
  ENST00000368356 FDPS-002 155308852-155320665 protein_coding
  ENST00000447866 FDPS-021 155308794-155320609 protein_coding
  ENST00000461507 FDPS-012 155308803-155318663 retained_intron
  ENST00000465559 FDPS-007 155308959-155317982 protein_coding
  ENST00000467076 FDPS-020 155308889-155320647 protein_coding
  ENST00000468479 FDPS-003 155308755-155319688 processed_transcript
  ENST00000470171 FDPS-008 155308968-155318814 processed_transcript
  ENST00000471117 FDPS-013 155308863-155318473 retained_intron
  ENST00000474345 FDPS-010 155308854-155318287 nonsense_mediated_decay
  ENST00000477057 FDPS-009 155308985-155318928 processed_transcript
  ENST00000487002 FDPS-005 155308914-155312979 retained_intron
  ENST00000489003 FDPS-011 155308984-155318687 retained_intron
  ENST00000489324 FDPS-018 155319655-155320609 retained_intron
  ENST00000490140 FDPS-017 155318719-155320665 retained_intron
  ENST00000491013 FDPS-004 155308914-155318905 protein_coding
  ENST00000492244 FDPS-015 155318188-155320665 processed_transcript
  ENST00000492887 FDPS-016 155318175-155319885 retained_intron
  ENST00000495308 FDPS-014 155308893-155318518 retained_intron
  ENST00000611010 FDPS-201 155308748-155320666 protein_coding
  ENST00000612683 FDPS-019 155308970-155320637 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000447866ENST00000467076ENST00000468479ENST00000487002ENST00000490140
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000447866 141.173±0.00 57.198±17.36 N/A 62.879±0.00 119.512±77.29
ENST00000467076 187.942±10.11 57.898±0.12 N/A 81.465±0.00 81.621±31.16
ENST00000468479 N/A 93.515±29.39 N/A 85.082±0.00 191.654±123.93
ENST00000487002 N/A N/A N/A N/A 20.843±19.26
ENST00000490140 N/A N/A 197.073±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000D0 CIL_0000D0_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004161 IEA dimethylallyltranstransferase activity
GO:0004337 IEA geranyltranstransferase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006695 TAS cholesterol biosynthetic process
GO:0008299 IEA isoprenoid biosynthetic process
GO:0016032 IEA viral process
GO:0033384 IEA geranyl diphosphate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045337 IEA farnesyl diphosphate biosynthetic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040890 fdps protein_coding Danio_rerio
ENSMUSG00000059743 Fdps protein_coding Mus_musculus

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