ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: chromosome 1 open reading frame 86
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162585 C1orf86 9606 - 1:2184461-2212720 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378543 C1orf86-006 2189548-2194750 protein_coding
  ENST00000378546 C1orf86-008 2189548-2194774 protein_coding
  ENST00000400918 C1orf86-009 2185175-2194751 protein_coding
  ENST00000400919 C1orf86-201 2184461-2194775 protein_coding
  ENST00000401813 C1orf86-012 2189548-2199907 processed_transcript
  ENST00000414253 C1orf86-001 2184478-2194775 nonsense_mediated_decay
  ENST00000420515 C1orf86-010 2191901-2194748 protein_coding
  ENST00000420964 C1orf86-014 2212171-2212574 retained_intron
  ENST00000428120 C1orf86-002 2184478-2194741 nonsense_mediated_decay
  ENST00000440825 C1orf86-011 2189580-2194739 nonsense_mediated_decay
  ENST00000469733 C1orf86-003 2184464-2207733 processed_transcript
  ENST00000476803 C1orf86-007 2189569-2194213 processed_transcript
  ENST00000487186 C1orf86-004 2189548-2212720 processed_transcript
  ENST00000497675 C1orf86-005 2189544-2194108 retained_intron
  ENST00000514625 C1orf86-013 2198063-2203882 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000378543ENST00000378546ENST00000400919ENST00000414253ENST00000420515ENST00000428120ENST00000469733ENST00000476803ENST00000497675
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000378543 N/A N/A N/A N/A 11.639±0.00
ENST00000378546 218.792±35.14 13.172±5.59 36.576±0.00 27.759±0.00 24.482±18.92
ENST00000400919 N/A 6.654±1.95 14.337±0.00 N/A 5.512±2.30
ENST00000414253 N/A N/A N/A N/A 4.567±0.60
ENST00000420515 N/A N/A N/A N/A 0.542±0.15
ENST00000428120 N/A N/A N/A N/A 3.934±0.00
ENST00000469733 N/A N/A N/A N/A 0.288±0.23
ENST00000476803 87.418±15.74 10.194±2.81 25.847±0.00 18.316±0.00 37.005±20.15
ENST00000497675 N/A 1.214±0.38 3.946±0.00 1.896±0.00 1.651±0.98

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007QV CIL_0007QV_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005694 IDA chromosome
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0019985 IMP translesion synthesis
GO:0030054 IDA cell junction
GO:0031593 IDA polyubiquitin binding
GO:0036297 IMP interstrand cross-link repair
GO:0043130 IDA ubiquitin binding
GO:0043240 IDA Fanconi anaemia nuclear complex
GO:0046872 IEA metal ion binding
GO:0070530 IDA K63-linked polyubiquitin binding

Homologs

No Homologs available.

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