ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: signal sequence receptor, beta (translocon-associated protein beta)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163479 SSR2 9606 - 1:156009048-156020959 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295702 SSR2-001 156009048-156020959 protein_coding
  ENST00000368311 SSR2-002 156010221-156020950 retained_intron
  ENST00000466905 SSR2-009 156011810-156020931 nonsense_mediated_decay
  ENST00000467041 SSR2-013 156020013-156020845 retained_intron
  ENST00000472467 SSR2-003 156009049-156013040 retained_intron
  ENST00000472898 SSR2-010 156011581-156020928 retained_intron
  ENST00000473699 SSR2-005 156009335-156020946 nonsense_mediated_decay
  ENST00000474377 SSR2-011 156011810-156020914 nonsense_mediated_decay
  ENST00000480176 SSR2-004 156009129-156020935 retained_intron
  ENST00000480567 SSR2-008 156009360-156020889 protein_coding
  ENST00000484320 SSR2-006 156009107-156020912 retained_intron
  ENST00000488179 SSR2-012 156009062-156020171 retained_intron
  ENST00000496742 SSR2-007 156009105-156020933 protein_coding
  ENST00000526212 SSR2-018 156018270-156020903 protein_coding
  ENST00000529008 SSR2-014 156009086-156020917 protein_coding
  ENST00000531790 SSR2-016 156009550-156020912 nonsense_mediated_decay
  ENST00000531917 SSR2-017 156011810-156020789 protein_coding
  ENST00000532074 SSR2-015 156009115-156020914 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000295702ENST00000368311ENST00000472898ENST00000496742ENST00000529008ENST00000532074
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000295702 257.137±50.39 269.130±81.63 98.235±0.00 182.641±0.00 233.408±173.51
ENST00000368311 N/A N/A N/A N/A 0.658±0.07
ENST00000472898 N/A N/A N/A N/A 152.558±89.64
ENST00000496742 138.675±26.83 N/A 32.167±0.00 N/A N/A
ENST00000529008 N/A N/A N/A N/A 94.136±0.00
ENST00000532074 N/A N/A N/A N/A 36.131±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000898 CIL_000898_0001 VISTA
CIL_0008P5 CIL_0008P5_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006412 TAS translation
GO:0006613 TAS cotranslational protein targeting to membrane
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016021 IEA integral component of membrane
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005230 ssr2 protein_coding Danio_rerio
ENSMUSG00000041355 Ssr2 protein_coding Mus_musculus

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