ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: neurofascin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163531 NFASC 9606 + 1:204828651-205022822 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339876 NFASC-201 204828654-205022821 protein_coding
  ENST00000360049 NFASC-202 204828654-205022821 protein_coding
  ENST00000367173 NFASC-006 204950557-205018371 protein_coding
  ENST00000401399 NFASC-001 204920632-205022822 protein_coding
  ENST00000403080 NFASC-003 204828695-204977139 protein_coding
  ENST00000404076 NFASC-012 204870831-205018371 protein_coding
  ENST00000404907 NFASC-010 204944226-205018371 protein_coding
  ENST00000404977 NFASC-002 204828651-205010924 processed_transcript
  ENST00000413225 NFASC-017 204988664-205016386 protein_coding
  ENST00000425360 NFASC-004 204981856-205018371 protein_coding
  ENST00000430393 NFASC-011 204944388-205018371 protein_coding
  ENST00000447819 NFASC-007 204997184-205018739 protein_coding
  ENST00000468328 NFASC-015 204981884-204988806 processed_transcript
  ENST00000471392 NFASC-016 204979388-204984329 processed_transcript
  ENST00000492085 NFASC-008 204987470-205000846 processed_transcript
  ENST00000493914 NFASC-014 204870604-204945032 processed_transcript
  ENST00000495396 NFASC-005 204986675-205022822 processed_transcript
  ENST00000503221 NFASC-023 205008445-205021031 retained_intron
  ENST00000504149 NFASC-025 204957658-204968825 processed_transcript
  ENST00000504476 NFASC-021 204944251-205016938 nonsense_mediated_decay
  ENST00000505079 NFASC-024 204929409-204954361 protein_coding
  ENST00000512826 NFASC-022 204957695-204990563 retained_intron
  ENST00000513543 NFASC-018 204944251-205016938 protein_coding
  ENST00000514644 NFASC-020 204870862-204974683 retained_intron
  ENST00000539706 NFASC-203 204828654-205022821 protein_coding

Homo sapiens Ensembl GRCh38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000367173ENST00000401399ENST00000403080ENST00000404977ENST00000413225ENST00000425360ENST00000447819ENST00000492085ENST00000495396ENST00000503221ENST00000504476ENST00000505079ENST00000513543ENST00000514644
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000367173 N/A 0.242±0.09 N/A N/A N/A
ENST00000401399 N/A 0.038±0.04 N/A N/A N/A
ENST00000403080 N/A 0.380±0.08 0.057±0.00 0.054±0.00 0.013±0.00
ENST00000404977 0.015±0.00 0.035±0.05 N/A N/A 0.014±0.01
ENST00000413225 N/A N/A N/A N/A 0.052±0.00
ENST00000425360 N/A 0.176±0.17 N/A 0.049±0.00 0.012±0.00
ENST00000447819 0.013±0.00 0.286±0.16 N/A N/A N/A
ENST00000492085 N/A 0.012±0.01 0.080±0.00 N/A 0.014±0.01
ENST00000495396 N/A N/A 0.051±0.00 N/A 0.005±0.00
ENST00000503221 N/A N/A N/A N/A 0.003±0.00
ENST00000504476 N/A 0.147±0.00 N/A N/A N/A
ENST00000505079 N/A N/A N/A N/A 0.072±0.00
ENST00000513543 N/A 0.184±0.00 N/A N/A N/A
ENST00000514644 N/A 0.006±0.00 N/A N/A 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00057C CIL_00057C_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002175 IEA protein localization to paranode region of axon
GO:0005515 IPI:IEA protein binding
GO:0005622 ISS intracellular
GO:0005886 TAS plasma membrane
GO:0005925 IDA focal adhesion
GO:0007411 TAS axon guidance
GO:0007422 IEA:ISS peripheral nervous system development
GO:0016021 IEA integral component of membrane
GO:0019226 IEA transmission of nerve impulse
GO:0030424 IEA axon
GO:0030913 IEA paranodal junction assembly
GO:0033010 IEA paranodal junction
GO:0033268 ISS node of Ranvier
GO:0033270 IEA paranode region of axon
GO:0034113 IEA heterotypic cell-cell adhesion
GO:0042552 ISS myelination
GO:0043194 ISS axon initial segment
GO:0045162 IEA clustering of voltage-gated sodium channels
GO:0050808 IEA synapse organization
GO:0070062 IDA extracellular vesicular exosome
GO:0071205 IEA protein localization to juxtaparanode region of axon
GO:0086080 IEA protein binding involved in heterotypic cell-cell adhesion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056910 NFASC (1 of 2) protein_coding Danio_rerio
ENSDARG00000061099 nfasca protein_coding Danio_rerio
ENSMUSG00000026442 Nfasc protein_coding Mus_musculus

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