ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ribosomal protein L9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163682 RPL9 9606 - 4:39454124-39458948 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295955 RPL9-001 39454124-39458948 protein_coding
  ENST00000437992 RPL9-010 39456328-39458915 retained_intron
  ENST00000449470 RPL9-002 39454137-39458888 protein_coding
  ENST00000503040 RPL9-011 39454562-39458915 protein_coding
  ENST00000503277 RPL9-008 39454132-39458441 retained_intron
  ENST00000504470 RPL9-009 39454624-39458922 protein_coding
  ENST00000506581 RPL9-012 39454139-39457682 protein_coding
  ENST00000508595 RPL9-007 39454137-39458925 protein_coding
  ENST00000511075 RPL9-006 39455811-39458931 retained_intron
  ENST00000511643 RPL9-013 39454138-39455276 retained_intron
  ENST00000514842 RPL9-005 39454171-39458901 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000295955ENST00000503040ENST00000504470ENST00000506581ENST00000508595ENST00000511075ENST00000514842
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000295955 972.136±203.67 375.479±67.85 285.849±0.00 407.224±0.00 539.834±515.26
ENST00000503040 N/A 261.803±65.58 N/A 270.989±0.00 475.098±255.32
ENST00000504470 N/A N/A N/A N/A 5.195±0.00
ENST00000506581 656.349±0.00 N/A 572.466±0.00 N/A N/A
ENST00000508595 430.560±0.00 N/A 211.655±0.00 N/A N/A
ENST00000511075 N/A N/A N/A N/A 14.320±0.31
ENST00000514842 N/A N/A N/A N/A 4.376±0.95

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002TV CIL_0002TV_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005840 IEA:TAS ribosome
GO:0005925 IDA focal adhesion
GO:0006412 IEA:NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0019843 IEA rRNA binding
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037350 rpl9 protein_coding Danio_rerio
ENSMUSG00000081906 Rpl9-ps1 protein_coding Mus_musculus

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