ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: Rho-related BTB domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164292 RHOBTB3 9606 + 5:95713522-95824383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379982 RHOBTB3-001 95731175-95796367 protein_coding
  ENST00000502541 RHOBTB3-016 95736939-95763542 nonsense_mediated_decay
  ENST00000503737 RHOBTB3-011 95783834-95794332 protein_coding
  ENST00000504179 RHOBTB3-017 95767755-95793246 protein_coding
  ENST00000504949 RHOBTB3-005 95717633-95756093 retained_intron
  ENST00000506817 RHOBTB3-004 95731146-95732751 protein_coding
  ENST00000506959 RHOBTB3-006 95730872-95748441 protein_coding
  ENST00000507186 RHOBTB3-008 95780007-95783869 retained_intron
  ENST00000510226 RHOBTB3-003 95713522-95736922 processed_transcript
  ENST00000510313 RHOBTB3-009 95768140-95789383 protein_coding
  ENST00000510623 RHOBTB3-014 95731956-95752287 nonsense_mediated_decay
  ENST00000511558 RHOBTB3-012 95783582-95788853 retained_intron
  ENST00000512878 RHOBTB3-007 95731725-95737011 retained_intron
  ENST00000513091 RHOBTB3-010 95788815-95824383 protein_coding
  ENST00000514198 RHOBTB3-015 95788821-95793496 protein_coding
  ENST00000515852 RHOBTB3-002 95713522-95732012 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHMVEC-DHUVECENST00000379982ENST00000502541ENST00000504179ENST00000504949
Transcript ID HAoEC HHSEC HMVEC-D HUVEC
ENST00000379982 10.301±8.31 0.254±0.00 13.737±0.00 8.251±7.99
ENST00000502541 N/A N/A N/A 10.293±1.05
ENST00000504179 N/A N/A N/A 13.103±1.70
ENST00000504949 N/A N/A N/A 3.547±0.37

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005524 IDA ATP binding
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006200 IDA ATP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0016887 IDA ATPase activity
GO:0017137 IPI Rab GTPase binding
GO:0042147 IMP retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090036 RHOBTB3 protein_coding Danio_rerio
ENSMUSG00000021589 Rhobtb3 protein_coding Mus_musculus

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