ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: sideroflexin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164466 SFXN1 9606 + 5:175477062-175529742 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000321442 SFXN1-001 175478395-175529742 protein_coding
  ENST00000421887 SFXN1-011 175521886-175526883 retained_intron
  ENST00000502393 SFXN1-010 175478575-175511579 protein_coding
  ENST00000502865 SFXN1-007 175492207-175516662 nonsense_mediated_decay
  ENST00000506963 SFXN1-004 175478592-175512181 protein_coding
  ENST00000507017 SFXN1-012 175477062-175510207 protein_coding
  ENST00000507395 SFXN1-006 175478565-175492546 retained_intron
  ENST00000507823 SFXN1-002 175478590-175524103 nonsense_mediated_decay
  ENST00000508290 SFXN1-008 175478564-175509403 retained_intron
  ENST00000513725 SFXN1-009 175478591-175510312 retained_intron
  ENST00000515736 SFXN1-014 175511436-175513738 retained_intron
  ENST00000515791 SFXN1-005 175478566-175491988 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000321442ENST00000502393ENST00000502865ENST00000507823ENST00000508290
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000321442 1.919±0.00 8.264±3.93 0.429±0.00 8.347±0.00 10.994±5.14
ENST00000502393 N/A 26.042±8.23 N/A N/A 14.531±0.57
ENST00000502865 N/A 20.958±7.17 N/A N/A 21.704±4.38
ENST00000507823 N/A N/A N/A N/A 3.148±0.29
ENST00000508290 N/A N/A N/A N/A 33.664±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006Z0 CIL_0006Z0_0001 CGP
CIL_0006Z4 CIL_0006Z4_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006811 IEA ion transport
GO:0006826 IEA iron ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0015075 IEA ion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030218 IEA erythrocyte differentiation
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019963 sfxn1 protein_coding Danio_rerio
ENSMUSG00000021474 Sfxn1 protein_coding Mus_musculus

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