ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: transformer 2 alpha homolog (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164548 TRA2A 9606 - 7:23504780-23532041 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297071 TRA2A-001 23504780-23532041 protein_coding
  ENST00000392502 TRA2A-201 23504784-23532041 protein_coding
  ENST00000448549 TRA2A-004 23516395-23532023 nonsense_mediated_decay
  ENST00000474586 TRA2A-005 23507421-23531680 processed_transcript
  ENST00000475970 TRA2A-009 23505316-23505885 retained_intron
  ENST00000482395 TRA2A-006 23505320-23506480 retained_intron
  ENST00000486934 TRA2A-007 23505468-23506208 retained_intron
  ENST00000490942 TRA2A-003 23513025-23531980 processed_transcript
  ENST00000494255 TRA2A-002 23507157-23531981 retained_intron
  ENST00000497730 TRA2A-008 23505249-23506206 processed_transcript
  ENST00000538367 TRA2A-202 23504784-23532041 protein_coding
  ENST00000621813 TRA2A-203 23504784-23532041 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000297071ENST00000474586ENST00000482395ENST00000490942ENST00000494255ENST00000497730ENST00000621813
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000297071 12.977±6.14 16.604±4.99 63.389±0.00 28.793±0.00 21.577±11.09
ENST00000474586 N/A 15.150±2.87 N/A 16.753±0.00 15.973±5.52
ENST00000482395 N/A N/A N/A N/A 59.883±7.23
ENST00000490942 N/A N/A N/A N/A 19.976±11.64
ENST00000494255 N/A 3.729±0.52 N/A 10.367±0.00 6.519±2.40
ENST00000497730 N/A N/A N/A N/A 31.444±0.00
ENST00000621813 2.675±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00022J CIL_00022J_0001 CGP
CIL_0002CW CIL_0002CW_0001 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000398 IDA mRNA splicing, via spliceosome
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007863 tra2a protein_coding Danio_rerio
ENSMUSG00000029817 Tra2a protein_coding Mus_musculus

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