ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: neuroligin 4, Y-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165246 NLGN4Y 9606 + Y:14522638-14845650 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297967 NLGN4Y-201 14622021-14733549 protein_coding
  ENST00000339174 NLGN4Y-005 14524574-14843647 protein_coding
  ENST00000355905 NLGN4Y-002 14523746-14843726 protein_coding
  ENST00000382868 NLGN4Y-003 14523746-14843726 protein_coding
  ENST00000382872 NLGN4Y-001 14522752-14845650 protein_coding
  ENST00000413217 NLGN4Y-006 14622181-14733549 protein_coding
  ENST00000471252 NLGN4Y-007 14522638-14622497 processed_transcript
  ENST00000476359 NLGN4Y-004 14523746-14843726 processed_transcript
  ENST00000481089 NLGN4Y-008 14524529-14622368 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000297967ENST00000339174ENST00000355905ENST00000382868ENST00000382872ENST00000413217ENST00000471252ENST00000476359ENST00000481089
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000297967 N/A 0.064±0.00 N/A N/A 6.120±4.85
ENST00000339174 N/A 0.007±0.00 N/A 1.548±0.00 0.689±0.42
ENST00000355905 N/A N/A N/A N/A 0.932±0.00
ENST00000382868 N/A 0.018±0.00 N/A N/A 0.365±0.00
ENST00000382872 0.677±0.00 0.006±0.00 N/A 1.648±0.00 0.743±0.31
ENST00000413217 N/A 0.070±0.00 N/A 8.850±0.00 N/A
ENST00000471252 N/A N/A N/A N/A 8.669±0.00
ENST00000476359 N/A 0.031±0.03 0.070±0.00 N/A 0.325±0.25
ENST00000481089 N/A 0.096±0.00 N/A N/A 6.003±3.91

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IBA receptor activity
GO:0005515 IPI protein binding
GO:0005887 IBA integral component of plasma membrane
GO:0007155 IEA cell adhesion
GO:0007158 TAS neuron cell-cell adhesion
GO:0007416 IBA synapse assembly
GO:0007612 IMP learning
GO:0008152 IEA metabolic process
GO:0009986 IBA cell surface
GO:0016020 IEA membrane
GO:0016787 IEA hydrolase activity
GO:0030054 IEA cell junction
GO:0035176 IMP social behavior
GO:0042043 IBA neurexin family protein binding
GO:0045202 IBA synapse
GO:0045211 IEA postsynaptic membrane
GO:0050839 TAS cell adhesion molecule binding
GO:0071625 IMP vocalization behavior

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077761 nlgn4b protein_coding Danio_rerio
ENSDARG00000079455 nlgn4a protein_coding Danio_rerio

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