ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: PCF11 cleavage and polyadenylation factor subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165494 PCF11 9606 + 11:83156988-83187451 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298281 PCF11-001 83156988-83187451 protein_coding
  ENST00000528336 PCF11-007 83180422-83183059 retained_intron
  ENST00000530304 PCF11-002 83157143-83168687 protein_coding
  ENST00000530660 PCF11-003 83157127-83168938 protein_coding
  ENST00000530906 PCF11-006 83171251-83181927 protein_coding
  ENST00000533018 PCF11-005 83157159-83163785 protein_coding
  ENST00000620955 PCF11-201 83157143-83168686 protein_coding
  ENST00000624931 PCF11-004 83157160-83158879 TEC

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000298281ENST00000530304ENST00000530660ENST00000624931
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000298281 1.988±0.10 4.038±2.32 5.329±0.00 16.466±0.00 6.699±5.11
ENST00000530304 N/A 12.049±0.00 N/A N/A N/A
ENST00000530660 N/A 4.908±0.00 N/A N/A N/A
ENST00000624931 N/A 14.105±1.17 33.924±0.00 N/A 17.261±10.14

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0005654 TAS nucleoplasm
GO:0005849 NAS mRNA cleavage factor complex
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006369 TAS termination of RNA polymerase II transcription
GO:0006379 NAS mRNA cleavage
GO:0008380 TAS RNA splicing
GO:0010467 TAS gene expression
GO:0031124 TAS mRNA 3'-end processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044625 pcf11 protein_coding Danio_rerio
ENSMUSG00000041328 Pcf11 protein_coding Mus_musculus

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