ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: calmin (calponin-like, transmembrane)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165959 CLMN 9606 - 14:95181940-95319906 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298912 CLMN-001 95181940-95319906 protein_coding
  ENST00000553733 CLMN-009 95221733-95319878 nonsense_mediated_decay
  ENST00000555336 CLMN-003 95213225-95296243 protein_coding
  ENST00000555615 CLMN-010 95213320-95307773 protein_coding
  ENST00000556416 CLMN-007 95191713-95193917 retained_intron
  ENST00000556441 CLMN-005 95191531-95194300 protein_coding
  ENST00000556454 CLMN-002 95191530-95210851 retained_intron
  ENST00000557215 CLMN-008 95191527-95194395 processed_transcript
  ENST00000557696 CLMN-006 95191527-95196584 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000298912ENST00000555336ENST00000556441ENST00000556454ENST00000557215
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000298912 0.054±0.02 1.043±0.66 0.073±0.00 0.227±0.00 0.486±0.36
ENST00000555336 N/A 7.907±0.00 N/A N/A N/A
ENST00000556441 2.816±0.52 N/A N/A N/A 0.028±0.00
ENST00000556454 0.631±0.20 3.669±2.77 N/A 0.333±0.00 1.266±1.00
ENST00000557215 N/A N/A 0.615±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00085I CIL_00085I_0001 VISTA
CIL_0003QP CIL_0003QP_0001 CGP
CIL_00099M CIL_00099M_0001 VISTA
CIL_0008Z4 CIL_0008Z4_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008285 IEA negative regulation of cell proliferation
GO:0016021 IEA integral component of membrane
GO:0031175 IEA neuron projection development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043667 CLMN (1 of 2) protein_coding Danio_rerio
ENSDARG00000068624 SYNE1 protein_coding Danio_rerio
ENSDARG00000096867 clmn protein_coding Danio_rerio
ENSMUSG00000021097 Clmn protein_coding Mus_musculus

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