ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ariadne RBR E3 ubiquitin protein ligase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166233 ARIH1 9606 + 15:72474326-72602985 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379887 ARIH1-001 72474326-72602985 protein_coding
  ENST00000561770 ARIH1-006 72572126-72582133 nonsense_mediated_decay
  ENST00000561987 ARIH1-009 72561452-72582118 retained_intron
  ENST00000562891 ARIH1-010 72580731-72583551 protein_coding
  ENST00000563310 ARIH1-007 72581472-72586559 retained_intron
  ENST00000564062 ARIH1-003 72474645-72563500 protein_coding
  ENST00000565950 ARIH1-005 72566370-72580779 retained_intron
  ENST00000566063 ARIH1-008 72580558-72583290 retained_intron
  ENST00000567762 ARIH1-004 72474936-72544923 processed_transcript
  ENST00000570085 ARIH1-002 72474490-72561547 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000379887ENST00000562891ENST00000563310ENST00000566063ENST00000570085
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000379887 0.472±0.00 1.705±0.84 0.529±0.00 1.432±0.00 1.695±0.82
ENST00000562891 17.379±0.00 N/A N/A N/A N/A
ENST00000563310 4.747±0.95 13.435±6.05 8.163±0.00 14.592±0.00 9.076±4.24
ENST00000566063 N/A N/A N/A N/A 19.591±0.00
ENST00000570085 5.449±0.00 27.615±0.00 N/A N/A 10.728±5.49

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 TAS ubiquitin ligase complex
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006511 TAS ubiquitin-dependent protein catabolic process
GO:0008270 IDA:IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019787 TAS small conjugating protein ligase activity
GO:0031625 IPI ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003616 arih1 protein_coding Danio_rerio
ENSDARG00000036870 arih1l protein_coding Danio_rerio
ENSMUSG00000025234 Arih1 protein_coding Mus_musculus

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