ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: PTPRF interacting protein, binding protein 2 (liprin beta 2)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166387 PPFIBP2 9606 + 11:7513298-7657127 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299492 PPFIBP2-001 7513770-7653756 protein_coding
  ENST00000524495 PPFIBP2-027 7642379-7650896 processed_transcript
  ENST00000524548 PPFIBP2-029 7565625-7598303 protein_coding
  ENST00000525597 PPFIBP2-017 7577040-7625799 protein_coding
  ENST00000526046 PPFIBP2-014 7539178-7565698 protein_coding
  ENST00000526873 PPFIBP2-011 7513298-7565756 protein_coding
  ENST00000527790 PPFIBP2-013 7538277-7610316 protein_coding
  ENST00000528883 PPFIBP2-007 7597186-7653351 protein_coding
  ENST00000528929 PPFIBP2-026 7649210-7650998 retained_intron
  ENST00000528947 PPFIBP2-012 7513768-7565756 protein_coding
  ENST00000529021 PPFIBP2-016 7577117-7656977 processed_transcript
  ENST00000529321 PPFIBP2-018 7597237-7598481 retained_intron
  ENST00000529575 PPFIBP2-015 7573905-7629511 protein_coding
  ENST00000529664 PPFIBP2-010 7650749-7653768 retained_intron
  ENST00000530081 PPFIBP2-023 7632867-7642342 protein_coding
  ENST00000530181 PPFIBP2-008 7605738-7653760 protein_coding
  ENST00000530189 PPFIBP2-019 7597587-7610523 retained_intron
  ENST00000530582 PPFIBP2-009 7630999-7657127 processed_transcript
  ENST00000532112 PPFIBP2-025 7648108-7649172 retained_intron
  ENST00000532172 PPFIBP2-024 7639732-7642156 retained_intron
  ENST00000532381 PPFIBP2-021 7632346-7639811 retained_intron
  ENST00000532416 PPFIBP2-020 7625811-7631243 retained_intron
  ENST00000532926 PPFIBP2-004 7576767-7653753 processed_transcript
  ENST00000533792 PPFIBP2-003 7576408-7653760 protein_coding
  ENST00000534409 PPFIBP2-022 7630923-7642382 protein_coding
  ENST00000534552 PPFIBP2-028 7651715-7653756 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000299492ENST00000524495ENST00000528883ENST00000528947ENST00000529575ENST00000529664ENST00000530081ENST00000530181ENST00000532172ENST00000532381ENST00000533792ENST00000534552
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000299492 N/A 0.353±0.18 N/A N/A 0.200±0.23
ENST00000524495 N/A N/A N/A N/A 0.373±0.27
ENST00000528883 N/A N/A N/A N/A 0.106±0.00
ENST00000528947 N/A N/A N/A N/A 0.126±0.00
ENST00000529575 N/A N/A N/A N/A 0.118±0.00
ENST00000529664 0.235±0.00 N/A 0.257±0.00 N/A 0.391±0.32
ENST00000530081 N/A N/A N/A N/A 0.355±0.00
ENST00000530181 N/A 1.037±0.65 N/A N/A 0.622±0.59
ENST00000532172 N/A N/A N/A 0.187±0.00 N/A
ENST00000532381 0.163±0.00 N/A N/A N/A N/A
ENST00000533792 N/A N/A N/A N/A 0.273±0.18
ENST00000534552 0.760±0.41 1.977±0.67 1.903±0.00 N/A 0.771±0.40

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000D4 CIL_0000D4_0002 CGP
CIL_0000DI CIL_0000DI_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005622 TAS intracellular
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008907 IEA integrase activity
GO:0015074 IEA DNA integration
GO:0048786 IEA presynaptic active zone

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029168 ppfibp2b protein_coding Danio_rerio
ENSDARG00000061977 ppfibp2a protein_coding Danio_rerio
ENSMUSG00000036528 Ppfibp2 protein_coding Mus_musculus

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