ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ribosomal protein L27a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166441 RPL27A 9606 + 11:8682411-8714759 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000314138 RPL27A-001 8682411-8689872 protein_coding
  ENST00000524496 RPL27A-007 8682789-8685847 protein_coding
  ENST00000525981 RPL27A-010 8683215-8685847 protein_coding
  ENST00000526562 RPL27A-009 8683201-8685848 protein_coding
  ENST00000529227 RPL27A-002 8682788-8683779 retained_intron
  ENST00000530022 RPL27A-008 8682810-8685848 protein_coding
  ENST00000530585 RPL27A-003 8682788-8684489 retained_intron
  ENST00000530913 RPL27A-011 8684259-8685848 protein_coding
  ENST00000531102 RPL27A-012 8689130-8714759 processed_transcript
  ENST00000531978 RPL27A-004 8682788-8685415 protein_coding
  ENST00000532359 RPL27A-006 8682792-8685848 protein_coding
  ENST00000534599 RPL27A-005 8682792-8685845 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000314138ENST00000524496ENST00000525981ENST00000526562ENST00000530022ENST00000531978ENST00000532359
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000314138 N/A 8.620±1.28 N/A N/A 6.242±3.70
ENST00000524496 804.802±59.83 259.139±101.34 251.454±0.00 564.784±0.00 566.209±521.57
ENST00000525981 1087.557±223.64 N/A 596.364±0.00 N/A N/A
ENST00000526562 N/A N/A N/A N/A 580.444±282.83
ENST00000530022 N/A N/A N/A N/A 137.190±62.79
ENST00000531978 N/A 75.387±41.32 N/A N/A 120.941±140.95
ENST00000532359 2147.535±133.48 958.658±357.34 934.511±0.00 1087.060±0.00 1007.436±732.56

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008Q2 CIL_0008Q2_0001 VISTA
CIL_00049H CIL_00049H_0001 CGP
CIL_00049E CIL_00049E_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS RNA binding
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA:NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000046364 Rpl27a protein_coding Mus_musculus

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