ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SEC11 homolog C (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166562 SEC11C 9606 + 18:59139477-59158836 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299714 SEC11C-007 59139875-59158832 nonsense_mediated_decay
  ENST00000509791 SEC11C-005 59139866-59157311 protein_coding
  ENST00000585864 SEC11C-004 59139884-59153361 retained_intron
  ENST00000587834 SEC11C-001 59139477-59158836 protein_coding
  ENST00000588875 SEC11C-006 59139899-59158832 protein_coding
  ENST00000591406 SEC11C-008 59155605-59158832 retained_intron
  ENST00000592774 SEC11C-002 59139893-59148012 processed_transcript
  ENST00000593132 SEC11C-003 59139888-59147732 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000299714ENST00000509791ENST00000585864ENST00000587834ENST00000588875ENST00000591406
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000299714 6.992±0.00 9.901±3.40 N/A 5.615±0.00 5.973±2.38
ENST00000509791 N/A 0.411±0.00 N/A N/A 0.458±0.12
ENST00000585864 N/A N/A N/A N/A 0.601±0.10
ENST00000587834 N/A 2.578±0.02 N/A N/A 4.614±2.87
ENST00000588875 24.651±4.39 21.887±12.69 11.311±0.00 11.999±0.00 9.215±6.83
ENST00000591406 31.649±2.93 29.195±13.87 24.349±0.00 9.429±0.00 11.013±3.26

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006O6 CIL_0006O6_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006412 TAS translation
GO:0006465 IEA signal peptide processing
GO:0006508 IEA proteolysis
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0008233 IEA peptidase activity
GO:0008236 IEA serine-type peptidase activity
GO:0010467 TAS gene expression
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0044267 TAS cellular protein metabolic process
GO:0050796 TAS regulation of insulin secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000024516 Sec11c protein_coding Mus_musculus

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