ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: cancer susceptibility candidate 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166734 CASC4 9606 + 15:44288729-44415758 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299957 CASC4-001 44288731-44415758 protein_coding
  ENST00000345795 CASC4-002 44288760-44415757 protein_coding
  ENST00000429162 CASC4-004 44288738-44308536 processed_transcript
  ENST00000557945 CASC4-005 44288731-44348918 nonsense_mediated_decay
  ENST00000558735 CASC4-007 44289105-44332059 nonsense_mediated_decay
  ENST00000558847 CASC4-009 44337764-44413543 protein_coding
  ENST00000559037 CASC4-008 44328700-44346149 processed_transcript
  ENST00000559151 CASC4-010 44406330-44409847 processed_transcript
  ENST00000559222 CASC4-006 44288729-44337881 protein_coding
  ENST00000559550 CASC4-012 44380864-44382229 processed_transcript
  ENST00000561305 CASC4-011 44403051-44414761 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000299957ENST00000345795ENST00000557945ENST00000559151ENST00000559222
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000299957 N/A 8.738±5.42 N/A 10.627±0.00 8.226±6.44
ENST00000345795 0.739±0.00 5.343±2.84 N/A 8.107±0.00 2.543±1.79
ENST00000557945 N/A N/A N/A N/A 0.333±0.03
ENST00000559151 0.422±0.00 0.210±0.07 0.636±0.00 N/A 0.107±0.07
ENST00000559222 N/A N/A N/A N/A 14.297±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000687 CIL_000687_0001 CGP
CIL_0004QJ CIL_0004QJ_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074490 casc4 protein_coding Danio_rerio
ENSMUSG00000060227 Casc4 protein_coding Mus_musculus

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