ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168495 POLR3D 9606 + 8:22245104-22254600 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306433 POLR3D-003 22245104-22251167 protein_coding
  ENST00000397802 POLR3D-001 22245235-22254600 protein_coding
  ENST00000517789 POLR3D-006 22247221-22250159 retained_intron
  ENST00000518039 POLR3D-002 22245432-22250896 nonsense_mediated_decay
  ENST00000519237 POLR3D-005 22245166-22248617 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000306433ENST00000397802ENST00000517789
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000306433 18.410±0.95 10.789±5.27 2.957±0.00 10.112±0.00 8.792±3.74
ENST00000397802 0.914±0.00 1.441±0.57 0.404±0.00 N/A 2.019±0.93
ENST00000517789 N/A 3.137±0.00 N/A N/A 5.715±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000810 CIL_000810_0001 VISTA
CIL_0008ZI CIL_0008ZI_0001 VISTA
CIL_000812 CIL_000812_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0001056 IBA RNA polymerase III activity
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005654 TAS nucleoplasm
GO:0005666 IEA:IBA DNA-directed RNA polymerase III complex
GO:0005829 TAS cytosol
GO:0006383 IEA:TAS transcription from RNA polymerase III promoter
GO:0006385 TAS transcription elongation from RNA polymerase III promoter
GO:0006386 TAS termination of RNA polymerase III transcription
GO:0010467 TAS gene expression
GO:0032481 TAS positive regulation of type I interferon production
GO:0032728 IDA positive regulation of interferon-beta production
GO:0045087 TAS innate immune response
GO:0045089 IDA positive regulation of innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000000776 Polr3d protein_coding Mus_musculus

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