ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: pregnancy specific beta-1-glycoprotein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170848 PSG6 9606 - 19:42728080-43205603 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000187910 PSG6-001 42902079-42917858 protein_coding
  ENST00000292125 PSG6-002 42903616-42917837 protein_coding
  ENST00000402456 PSG6-004 42909699-42917882 retained_intron
  ENST00000402603 PSG6-003 42902086-42917882 protein_coding
  ENST00000484292 PSG6-005 42910476-42918010 retained_intron
  ENST00000594375 PSG6-006 42907725-42917887 protein_coding
  ENST00000595062 PSG6-008 42906636-42916398 retained_intron
  ENST00000599753 PSG6-010 42902121-42910804 nonsense_mediated_decay
  ENST00000601833 PSG6-009 42915302-42919563 protein_coding
  ENST00000621241 PSG6-201 42728080-43205603 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000292125ENST00000599753ENST00000601833ENST00000621241
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000292125 N/A N/A 0.108±0.00 N/A
ENST00000599753 N/A N/A N/A 0.029±0.00
ENST00000601833 0.064±0.00 0.014±0.00 0.045±0.00 0.006±0.00
ENST00000621241 N/A N/A N/A 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003UJ CIL_0003UJ_000A CGP
CIL_0003UJ CIL_0003UJ_000F CGP
CIL_0003UJ CIL_0003UJ_000I CGP
CIL_0003UJ CIL_0003UJ_000G CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005576 NAS extracellular region
GO:0007565 NAS female pregnancy

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041119 ceacam1 protein_coding Danio_rerio
ENSDARG00000076981 zgc:198329 protein_coding Danio_rerio
ENSDARG00000078177 cxcr3.1 protein_coding Danio_rerio
ENSDARG00000079372 si:ch211-264f5.6 protein_coding Danio_rerio
ENSDARG00000092520 si:dkey-250k15.10 protein_coding Danio_rerio
ENSDARG00000093279 si:dkey-11o1.3 protein_coding Danio_rerio
ENSDARG00000095048 si:dkey-250k15.7 protein_coding Danio_rerio
ENSDARG00000095134 si:dkey-250k15.9 protein_coding Danio_rerio
ENSDARG00000095772 si:dkey-11o1.2 protein_coding Danio_rerio

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