ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170860 LSM3 9606 + 3:14178358-14201119 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306024 LSM3-001 14178358-14201119 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000306024
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000306024 16.429±1.55 9.208±1.96 8.434±0.00 9.903±0.00 11.114±4.81

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007GU CIL_0007GU_0001 CGP
CIL_0007GZ CIL_0007GZ_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000288 TAS nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000398 IC mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0005829 TAS cytosol
GO:0006397 TAS mRNA processing
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0043928 TAS exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
GO:0044822 IDA poly(A) RNA binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089663 LSM3 protein_coding Danio_rerio
ENSMUSG00000034192 Lsm3 protein_coding Mus_musculus

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