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ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: gephyrin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171723 GPHN 9606 + 14:66507407-67181803 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315266 GPHN-003 66507407-67181798 protein_coding
  ENST00000459628 GPHN-004 66508138-67059029 protein_coding
  ENST00000478722 GPHN-006 66507407-67181803 protein_coding
  ENST00000543237 GPHN-007 66508504-67181023 protein_coding
  ENST00000544752 GPHN-008 66823095-67181093 processed_transcript
  ENST00000553936 GPHN-010 66508516-66916034 nonsense_mediated_decay
  ENST00000555456 GPHN-014 66824474-67058726 protein_coding
  ENST00000555503 GPHN-017 67113070-67169136 protein_coding
  ENST00000555527 GPHN-016 67111915-67168991 processed_transcript
  ENST00000555668 GPHN-011 66508507-66880032 nonsense_mediated_decay
  ENST00000556020 GPHN-009 66509059-66824554 processed_transcript
  ENST00000556240 GPHN-019 67180849-67181792 protein_coding
  ENST00000556501 GPHN-015 67058649-67110287 retained_intron
  ENST00000556633 GPHN-013 66508507-66922758 nonsense_mediated_decay
  ENST00000557654 GPHN-012 66508516-66880033 nonsense_mediated_decay
  ENST00000557678 GPHN-018 67143001-67165230 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000315266ENST00000459628ENST00000478722ENST00000543237ENST00000544752ENST00000556240ENST00000556633
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000315266 N/A N/A N/A N/A 0.044±0.00
ENST00000459628 N/A N/A N/A 2.351±0.00 1.546±1.00
ENST00000478722 0.194±0.04 1.311±0.65 N/A 0.802±0.00 1.098±0.62
ENST00000543237 N/A 1.577±0.21 N/A N/A 1.029±0.22
ENST00000544752 0.211±0.00 2.304±0.59 1.098±0.00 2.541±0.00 1.408±0.83
ENST00000556240 7.542±1.44 N/A 37.328±0.00 N/A N/A
ENST00000556633 N/A N/A N/A N/A 4.365±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001KA CIL_0001KA_0002 CGP
CIL_00010J CIL_00010J_0001 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 TAS plasma membrane
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006777 IEA Mo-molybdopterin cofactor biosynthetic process
GO:0007529 IEA establishment of synaptic specificity at neuromuscular junction
GO:0016740 TAS transferase activity
GO:0030054 IEA cell junction
GO:0032324 TAS:IEA molybdopterin cofactor biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0045211 IEA postsynaptic membrane
GO:0046872 IEA metal ion binding
GO:0060077 IEA inhibitory synapse
GO:0061598 IEA molybdopterin adenylyltransferase activity
GO:0061599 IEA molybdopterin molybdotransferase activity
GO:0072579 IEA glycine receptor clustering

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000047454 Gphn protein_coding Mus_musculus

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