ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: C-type lectin domain family 7, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172243 CLEC7A 9606 - 12:10116777-10130258 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298523 CLEC7A-012 10117862-10130153 protein_coding
  ENST00000304084 CLEC7A-013 10118227-10130237 protein_coding
  ENST00000310002 CLEC7A-003 10127327-10130189 protein_coding
  ENST00000349926 CLEC7A-008 10118458-10130082 nonsense_mediated_decay
  ENST00000353231 CLEC7A-001 10116777-10130241 protein_coding
  ENST00000396484 CLEC7A-004 10118068-10130185 protein_coding
  ENST00000465100 CLEC7A-002 10118458-10130082 nonsense_mediated_decay
  ENST00000525605 CLEC7A-014 10127446-10130257 protein_coding
  ENST00000528799 CLEC7A-011 10124746-10130183 retained_intron
  ENST00000529761 CLEC7A-007 10116777-10130258 nonsense_mediated_decay
  ENST00000531192 CLEC7A-006 10118549-10130257 nonsense_mediated_decay
  ENST00000533022 CLEC7A-009 10118458-10130082 protein_coding
  ENST00000534609 CLEC7A-005 10116777-10130257 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000298523ENST00000349926ENST00000353231ENST00000396484ENST00000465100ENST00000528799ENST00000529761ENST00000534609
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000298523 N/A 0.011±0.00 N/A 0.094±0.00
ENST00000349926 N/A N/A N/A 0.320±0.00
ENST00000353231 0.124±0.00 0.038±0.03 2.985±0.00 0.064±0.04
ENST00000396484 N/A 0.029±0.00 N/A N/A
ENST00000465100 N/A 0.061±0.00 N/A N/A
ENST00000528799 N/A N/A N/A 0.064±0.00
ENST00000529761 N/A N/A N/A 0.020±0.00
ENST00000534609 0.048±0.00 N/A N/A 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000TC CIL_0000TC_0001 CGP
CIL_0000T7 CIL_0000T7_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002221 IDA pattern recognition receptor signaling pathway
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006910 IDA phagocytosis, recognition
GO:0006954 IEA inflammatory response
GO:0008037 IDA cell recognition
GO:0008329 IDA signaling pattern recognition receptor activity
GO:0009756 TAS carbohydrate mediated signaling
GO:0016021 TAS integral component of membrane
GO:0030246 IDA carbohydrate binding
GO:0042110 TAS T cell activation
GO:0042287 NAS MHC protein binding
GO:0042832 NAS defense response to protozoan
GO:0045087 IEA innate immune response
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000079293 Clec7a polymorphic_pseudogene Mus_musculus
ENSMUSG00000102040 Clec7a protein_coding Mus_musculus

Loading