ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: desmin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175084 DES 9606 + 2:219418377-219426739 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373960 DES-001 219418377-219426739 protein_coding
  ENST00000477226 DES-006 219420045-219423820 retained_intron
  ENST00000483395 DES-008 219425520-219426184 retained_intron
  ENST00000492726 DES-007 219420122-219423843 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000373960ENST00000477226ENST00000483395ENST00000492726
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000373960 0.096±0.00 0.286±0.20 0.093±0.00 0.334±0.62
ENST00000477226 N/A 0.698±0.20 N/A N/A
ENST00000483395 1.227±0.00 1.135±0.00 N/A 0.085±0.00
ENST00000492726 N/A 0.602±0.50 0.103±0.00 0.136±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000916 CIL_000916_0001 VISTA
CIL_0006NZ CIL_0006NZ_0001 CGP
CIL_0006O0 CIL_0006O0_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005882 IEA intermediate filament
GO:0005916 IEA fascia adherens
GO:0006936 TAS muscle contraction
GO:0007010 TAS cytoskeleton organization
GO:0008016 TAS regulation of heart contraction
GO:0008092 IPI cytoskeletal protein binding
GO:0030018 IDA Z disc
GO:0030049 TAS muscle filament sliding
GO:0031594 IEA neuromuscular junction
GO:0042383 IEA sarcolemma
GO:0042802 IPI identical protein binding
GO:0043292 IEA contractile fiber
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005221 desmb protein_coding Danio_rerio
ENSDARG00000058656 desma protein_coding Danio_rerio
ENSMUSG00000026208 Des protein_coding Mus_musculus

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