ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: solute carrier organic anion transporter family, member 3A1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176463 SLCO3A1 9606 + 15:91853695-92172435 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318445 SLCO3A1-001 91853695-92165903 protein_coding
  ENST00000424469 SLCO3A1-002 91853856-92172435 protein_coding
  ENST00000553304 SLCO3A1-007 91854121-91916378 protein_coding
  ENST00000553653 SLCO3A1-003 91853723-92151216 retained_intron
  ENST00000555111 SLCO3A1-008 91854025-91908759 processed_transcript
  ENST00000555210 SLCO3A1-013 92126186-92162946 nonsense_mediated_decay
  ENST00000555513 SLCO3A1-011 92153563-92163208 processed_transcript
  ENST00000555549 SLCO3A1-005 92097930-92163546 processed_transcript
  ENST00000555769 SLCO3A1-006 91854336-92155269 processed_transcript
  ENST00000555892 SLCO3A1-012 92126184-92171847 nonsense_mediated_decay
  ENST00000556649 SLCO3A1-009 91941318-92104537 processed_transcript
  ENST00000564072 SLCO3A1-014 92161575-92163546 retained_intron
  ENST00000566477 SLCO3A1-015 92170872-92172435 retained_intron

Homo sapiens Ensembl GRCh38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000318445ENST00000424469ENST00000553304ENST00000553653ENST00000555210ENST00000555513ENST00000555549ENST00000555769ENST00000555892ENST00000556649ENST00000564072
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000318445 N/A 0.607±0.43 N/A 0.046±0.04
ENST00000424469 N/A N/A N/A 0.173±0.09
ENST00000553304 0.735±0.00 N/A N/A 0.085±0.02
ENST00000553653 N/A 0.476±0.00 N/A 0.126±0.11
ENST00000555210 N/A N/A N/A 0.427±0.34
ENST00000555513 N/A N/A 0.484±0.00 0.078±0.00
ENST00000555549 0.427±0.11 0.641±0.31 N/A 0.082±0.05
ENST00000555769 N/A 0.516±0.17 0.445±0.00 0.096±0.08
ENST00000555892 N/A 2.211±0.26 N/A 0.282±0.17
ENST00000556649 N/A N/A 0.329±0.00 N/A
ENST00000564072 N/A N/A N/A 0.060±0.02

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0043252 TAS sodium-independent organic anion transport
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018726 slco3a1 protein_coding Danio_rerio
ENSDARG00000068296 SLCO3A1 (2 of 2) protein_coding Danio_rerio
ENSMUSG00000025790 Slco3a1 protein_coding Mus_musculus

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