ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: acyl-CoA synthetase family member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176715 ACSF3 9606 + 16:89088375-89155846 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317447 ACSF3-001 89093809-89155763 protein_coding
  ENST00000378345 ACSF3-002 89093898-89154588 protein_coding
  ENST00000393145 ACSF3-020 89147567-89154586 retained_intron
  ENST00000406948 ACSF3-003 89093883-89154589 protein_coding
  ENST00000535176 ACSF3-013 89145950-89151348 protein_coding
  ENST00000537116 ACSF3-005 89136548-89155846 processed_transcript
  ENST00000537155 ACSF3-016 89145161-89154584 retained_intron
  ENST00000537290 ACSF3-009 89093855-89102648 protein_coding
  ENST00000537895 ACSF3-011 89088375-89114473 protein_coding
  ENST00000538340 ACSF3-015 89102613-89122392 protein_coding
  ENST00000540697 ACSF3-010 89093868-89133262 protein_coding
  ENST00000541755 ACSF3-023 89093904-89100767 protein_coding
  ENST00000542688 ACSF3-006 89098711-89154540 nonsense_mediated_decay
  ENST00000543676 ACSF3-014 89102696-89122832 protein_coding
  ENST00000544543 ACSF3-012 89102352-89145400 protein_coding
  ENST00000562204 ACSF3-021 89112201-89146044 processed_transcript
  ENST00000562750 ACSF3-019 89150600-89151222 processed_transcript
  ENST00000614302 ACSF3-201 89093809-89155846 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000317447ENST00000378345ENST00000393145ENST00000406948ENST00000537155ENST00000537290ENST00000538340ENST00000541755ENST00000542688ENST00000544543ENST00000614302
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000317447 N/A 0.869±0.00 N/A N/A N/A
ENST00000378345 N/A N/A N/A N/A 2.783±0.09
ENST00000393145 1.297±0.00 0.663±0.18 1.544±0.00 1.267±0.00 0.808±0.57
ENST00000406948 N/A 2.327±0.88 N/A N/A 3.605±2.61
ENST00000537155 36.682±8.17 7.152±1.70 16.317±0.00 N/A 5.583±0.88
ENST00000537290 N/A N/A N/A N/A 7.157±1.90
ENST00000538340 N/A N/A N/A 23.319±0.00 N/A
ENST00000541755 N/A N/A N/A N/A 0.937±0.00
ENST00000542688 N/A 3.089±1.03 N/A 4.434±0.00 2.173±0.91
ENST00000544543 13.197±0.00 5.492±1.18 N/A N/A 4.763±0.50
ENST00000614302 N/A 0.979±0.24 N/A 1.358±0.00 1.139±0.84

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00091T CIL_00091T_0001 VISTA
CIL_0006AJ CIL_0006AJ_0002 CGP
CIL_0008HA CIL_0008HA_0001 VISTA
CIL_0006AI CIL_0006AI_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006631 IDA fatty acid metabolic process
GO:0006633 IDA fatty acid biosynthetic process
GO:0008152 IEA metabolic process
GO:0016878 IDA acid-thiol ligase activity
GO:0090409 IDA malonyl-CoA synthetase activity
GO:0090410 IDA malonate catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059503 ACSF3 protein_coding Danio_rerio
ENSMUSG00000015016 Acsf3 protein_coding Mus_musculus

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