ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: selenoprotein W, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000178980 SEPW1 9606 + 19:47778572-47784686 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000509570 SEPW1-201 47778585-47784684 protein_coding
  ENST00000593892 SEPW1-006 47778677-47784564 protein_coding
  ENST00000595509 SEPW1-010 47779239-47780895 processed_transcript
  ENST00000595615 SEPW1-007 47778701-47781556 protein_coding
  ENST00000598083 SEPW1-012 47780756-47781408 retained_intron
  ENST00000598273 SEPW1-002 47778933-47784681 retained_intron
  ENST00000598956 SEPW1-011 47780388-47784648 retained_intron
  ENST00000599302 SEPW1-008 47778709-47780177 processed_transcript
  ENST00000599590 SEPW1-009 47778709-47779962 processed_transcript
  ENST00000599627 SEPW1-014 47781080-47784399 retained_intron
  ENST00000599874 SEPW1-004 47778683-47784457 nonsense_mediated_decay
  ENST00000601048 SEPW1-001 47778572-47784681 protein_coding
  ENST00000601419 SEPW1-005 47778691-47784654 processed_transcript
  ENST00000601937 SEPW1-013 47780815-47784686 retained_intron
  ENST00000602163 SEPW1-003 47782180-47784682 retained_intron
  ENST00000612212 SEPW1-202 47778585-47784684 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000593892ENST00000598273ENST00000598956ENST00000601419ENST00000601937ENST00000602163ENST00000612212
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000593892 420.208±91.83 75.947±28.42 N/A 116.508±0.00 126.781±42.21
ENST00000598273 N/A N/A 12.531±0.00 N/A 6.074±6.30
ENST00000598956 N/A N/A 43.684±0.00 N/A N/A
ENST00000601419 337.811±57.02 79.144±35.46 88.925±0.00 99.567±0.00 61.588±46.85
ENST00000601937 1040.331±202.55 186.578±50.71 190.462±0.00 115.202±0.00 130.444±76.90
ENST00000602163 N/A N/A N/A N/A 0.208±0.10
ENST00000612212 N/A 47.119±15.28 N/A N/A 97.542±82.73

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0008430 IEA selenium binding
GO:0016209 IEA antioxidant activity
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035136 sepw1 protein_coding Danio_rerio
ENSMUSG00000041571 Sepw1 protein_coding Mus_musculus

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