ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: major histocompatibility complex, class II, DQ beta 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179344 HLA-DQB1 9606 - 6:32659467-32668383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374943 HLA-DQB1-002 32659467-32666684 protein_coding
  ENST00000399079 HLA-DQB1-004 32659467-32666664 protein_coding
  ENST00000399082 HLA-DQB1-007 32659467-32666652 protein_coding
  ENST00000399084 HLA-DQB1-003 32659467-32668383 protein_coding
  ENST00000434651 HLA-DQB1-001 32659467-32666694 protein_coding
  ENST00000443574 HLA-DQB1-010 32659886-32662450 processed_transcript
  ENST00000460185 HLA-DQB1-009 32659886-32660440 processed_transcript
  ENST00000484729 HLA-DQB1-008 32660107-32666638 nonsense_mediated_decay
  ENST00000487676 HLA-DQB1-005 32659467-32666638 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHUVECENST00000374943ENST00000399082ENST00000399084ENST00000434651ENST00000443574ENST00000460185ENST00000484729ENST00000487676
Transcript ID HAoEC HHSEC HUVEC
ENST00000374943 0.129±0.00 N/A N/A
ENST00000399082 0.048±0.00 N/A N/A
ENST00000399084 0.030±0.00 N/A N/A
ENST00000434651 0.184±0.01 10.208±0.00 N/A
ENST00000443574 0.374±0.00 N/A N/A
ENST00000460185 0.609±0.16 60.134±0.00 0.145±0.00
ENST00000484729 0.371±0.22 22.439±0.00 N/A
ENST00000487676 0.036±0.02 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001PL CIL_0001PL_0006 CGP
CIL_0002XS CIL_0002XS_0007 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0002504 IEA antigen processing and presentation of peptide or polysaccharide antigen via MHC class II
GO:0005515 IEA protein binding
GO:0006955 IEA immune response
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019882 IEA antigen processing and presentation
GO:0042612 IEA MHC class I protein complex
GO:0042613 IEA MHC class II protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041705 si:busm1-228j01.6 protein_coding Danio_rerio
ENSDARG00000056330 mhc2dbb protein_coding Danio_rerio
ENSDARG00000074510 si:busm1-104n07.3 protein_coding Danio_rerio
ENSDARG00000076307 si:zfos-2070c2.3 protein_coding Danio_rerio
ENSDARG00000079105 mhc2dab protein_coding Danio_rerio
ENSDARG00000088872 si:busm1-228j01.4 protein_coding Danio_rerio
ENSMUSG00000073421 H2-Ab1 protein_coding Mus_musculus

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