ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ribosomal protein L35a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182899 RPL35A 9606 + 3:197949987-197956610 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329092 RPL35A-005 197950193-197954147 processed_transcript
  ENST00000429437 RPL35A-007 197950206-197955817 nonsense_mediated_decay
  ENST00000439255 RPL35A-008 197950954-197955817 nonsense_mediated_decay
  ENST00000442341 RPL35A-006 197950557-197954120 protein_coding
  ENST00000448864 RPL35A-002 197950194-197955851 protein_coding
  ENST00000464167 RPL35A-001 197949987-197956610 protein_coding
  ENST00000474640 RPL35A-009 197953563-197955851 retained_intron
  ENST00000485439 RPL35A-004 197950190-197954451 retained_intron
  ENST00000496582 RPL35A-003 197950193-197951665 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000429437ENST00000442341ENST00000448864ENST00000464167ENST00000474640ENST00000485439ENST00000496582
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000429437 1628.450±12.92 487.522±78.38 312.340±0.00 629.695±0.00 261.565±203.03
ENST00000442341 N/A N/A N/A N/A 0.975±0.00
ENST00000448864 1467.705±77.52 578.733±248.31 242.865±0.00 515.301±0.00 375.914±246.08
ENST00000464167 N/A N/A N/A N/A 70.245±58.63
ENST00000474640 N/A N/A N/A N/A 1.296±0.00
ENST00000485439 N/A 110.824±6.76 N/A N/A 795.009±999.56
ENST00000496582 N/A N/A N/A N/A 1.294±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0006C8 CIL_0006C8_0001 CGP
CIL_0006C9 CIL_0006C9_0001 CGP
CIL_0006CA CIL_0006CA_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006364 IMP rRNA processing
GO:0006412 IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0042273 IMP ribosomal large subunit biogenesis
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088030 rpl35a protein_coding Danio_rerio
ENSMUSG00000060636 Rpl35a protein_coding Mus_musculus

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