Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]
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                ),
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$value = array(
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$config = '_cake_core_'
$settings = array(
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$success = false
Cache::write() - CORE/Cake/Cache/Cache.php, line 323
I18n::translate() - CORE/Cake/I18n/I18n.php, line 237
__d - CORE/Cake/basics.php, line 617
Cache::write() - CORE/Cake/Cache/Cache.php, line 321
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::__call() - CORE/Cake/Model/Model.php, line 808
Gene::findByid() - APP/Controller/GeneController.php, line 301
GeneController::show() - APP/Controller/GeneController.php, line 301
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

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                ),
                E_USER_WARNING
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$value = null
$config = '_cake_model_'
$settings = array(
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	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
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)
$success = false
Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::__call() - CORE/Cake/Model/Model.php, line 808
Gene::findByid() - APP/Controller/GeneController.php, line 301
GeneController::show() - APP/Controller/GeneController.php, line 301
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

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                ),
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$key = 'default_angiogenes_list'
$value = array(
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	(int) 5 => 'homologues',
	(int) 6 => 'repeats',
	(int) 7 => 'study',
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$config = '_cake_model_'
$settings = array(
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$success = false
Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 236
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::__call() - CORE/Cake/Model/Model.php, line 808
Gene::findByid() - APP/Controller/GeneController.php, line 301
GeneController::show() - APP/Controller/GeneController.php, line 301
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

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                ),
                E_USER_WARNING
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$key = 'default_angiogenes_genes'
$value = null
$config = '_cake_model_'
$settings = array(
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	'path' => '/var/www/angiogenes/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
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)
$success = false
Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::_cacheDescription() - CORE/Cake/Model/Datasource/DataSource.php, line 310
DataSource::describe() - CORE/Cake/Model/Datasource/DataSource.php, line 135
Mysql::describe() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 332
Model::schema() - CORE/Cake/Model/Model.php, line 1372
DboSource::fields() - CORE/Cake/Model/Datasource/DboSource.php, line 2491
DboSource::read() - CORE/Cake/Model/Datasource/DboSource.php, line 1054
Model::_readDataSource() - CORE/Cake/Model/Model.php, line 2947
Model::find() - CORE/Cake/Model/Model.php, line 2919
DboSource::query() - CORE/Cake/Model/Datasource/DboSource.php, line 597
Model::__call() - CORE/Cake/Model/Model.php, line 808
Gene::findByid() - APP/Controller/GeneController.php, line 301
GeneController::show() - APP/Controller/GeneController.php, line 301
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165

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Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::_cacheDescription() - CORE/Cake/Model/Datasource/DataSource.php, line 310
Mysql::describe() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 372
Model::schema() - CORE/Cake/Model/Model.php, line 1372
DboSource::fields() - CORE/Cake/Model/Datasource/DboSource.php, line 2491
DboSource::read() - CORE/Cake/Model/Datasource/DboSource.php, line 1054
Model::_readDataSource() - CORE/Cake/Model/Model.php, line 2947
Model::find() - CORE/Cake/Model/Model.php, line 2919
DboSource::query() - CORE/Cake/Model/Datasource/DboSource.php, line 597
Model::__call() - CORE/Cake/Model/Model.php, line 808
Gene::findByid() - APP/Controller/GeneController.php, line 301
GeneController::show() - APP/Controller/GeneController.php, line 301
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

• HOME
• GENES
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Gene Info
Description:	4-aminobutyrate aminotransferase
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000183044	ABAT	9606	+	16:8674565-8784575	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000268251		ABAT-001	8674565-8784575	protein_coding
	ENST00000396600		ABAT-201	8712969-8784575	protein_coding
	ENST00000425191		ABAT-005	8720716-8781590	protein_coding
	ENST00000561870		ABAT-013	8712955-8748135	protein_coding
	ENST00000562115		ABAT-011	8720822-8757804	nonsense_mediated_decay
	ENST00000563215		ABAT-004	8713362-8715633	processed_transcript
	ENST00000563992		ABAT-007	8674617-8737473	retained_intron
	ENST00000564453		ABAT-015	8765785-8768846	retained_intron
	ENST00000564714		ABAT-008	8674596-8750456	protein_coding
	ENST00000565016		ABAT-012	8713601-8750485	protein_coding
	ENST00000565671		ABAT-014	8746002-8760429	processed_transcript
	ENST00000566590		ABAT-002	8712990-8781531	nonsense_mediated_decay
	ENST00000567812		ABAT-003	8713614-8781579	protein_coding
	ENST00000568847		ABAT-009	8712837-8746025	protein_coding
	ENST00000569156		ABAT-006	8720719-8781522	protein_coding
	ENST00000569695		ABAT-010	8712968-8713865	processed_transcript

Expression Patterns Split around values. Cell Line Name Tissue Condition Heat Map Numeric Values Transcript ID HAoEC ENST00000268251 10.453±1.18

Conserved Regions
Region ID	Sub-Region	Region Type
CIL_0008RJ	CIL_0008RJ_0001	VISTA
CIL_0007RL	CIL_0007RL_0001	VISTA
CIL_0000ER	CIL_0000ER_0001	CGP
CIL_0000EU	CIL_0000EU_0001	CGP

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0001666	IEA	response to hypoxia
GO:0003867	TAS:IEA	4-aminobutyrate transaminase activity
GO:0005739	ISS	mitochondrion
GO:0005759	TAS	mitochondrial matrix
GO:0007268	TAS	synaptic transmission
GO:0007269	TAS	neurotransmitter secretion
GO:0007620	IEA	copulation
GO:0007626	IEA	locomotory behavior
GO:0008483	IEA	transaminase activity
GO:0009448	IEA	gamma-aminobutyric acid metabolic process
GO:0009450	NAS	gamma-aminobutyric acid catabolic process
GO:0010039	IEA	response to iron ion
GO:0030170	IEA:IDA	pyridoxal phosphate binding
GO:0032144	IDA	4-aminobutyrate transaminase complex
GO:0032145	ISS	succinate-semialdehyde dehydrogenase binding
GO:0035094	IEA	response to nicotine
GO:0042135	NAS	neurotransmitter catabolic process
GO:0042220	IEA	response to cocaine
GO:0042493	IEA	response to drug
GO:0042803	IPI	protein homodimerization activity
GO:0043005	IEA	neuron projection
GO:0045471	IEA	response to ethanol
GO:0045776	IEA	negative regulation of blood pressure
GO:0047298	IEA	(S)-3-amino-2-methylpropionate transaminase activity
GO:0048148	ISS	behavioral response to cocaine
GO:0070062	IDA	extracellular vesicular exosome

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000006031	abat		protein_coding	Danio_rerio
ENSMUSG00000057880	Abat		protein_coding	Mus_musculus

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Cache::write() - CORE/Cake/Cache/Cache.php, line 323
App::shutdown() - CORE/Cake/Core/App.php, line 899
[main] - [internal], line ??

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			(int) 6 => '`Gene`.`start`',
			(int) 7 => '`Gene`.`end`',
			(int) 8 => '`Gene`.`gene_name`',
			(int) 9 => '`Gene`.`gene_source`',
			(int) 10 => '`Gene`.`gene_biotype`',
			(int) 11 => '`Gene`.`annotation_version`',
			(int) 12 => '`Gene`.`gene_description`'
		)
	)
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/angiogenes/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false
Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DboSource::__destruct() - CORE/Cake/Model/Datasource/DboSource.php, line 3539
[main] - [internal], line ??