ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: PARP1 binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185480 PARPBP 9606 + 12:102120185-102197520 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327680 PARPBP-001 102120245-102197520 protein_coding
  ENST00000392909 PARPBP-012 102120204-102151823 nonsense_mediated_decay
  ENST00000392911 PARPBP-006 102120247-102196429 protein_coding
  ENST00000392914 PARPBP-013 102123886-102152012 retained_intron
  ENST00000412715 PARPBP-010 102123988-102197361 protein_coding
  ENST00000417507 PARPBP-009 102123988-102197361 protein_coding
  ENST00000457614 PARPBP-003 102123988-102197361 nonsense_mediated_decay
  ENST00000535811 PARPBP-011 102123988-102197361 processed_transcript
  ENST00000537257 PARPBP-007 102120245-102149007 protein_coding
  ENST00000541394 PARPBP-002 102120185-102196667 protein_coding
  ENST00000541668 PARPBP-004 102120383-102155280 processed_transcript
  ENST00000543784 PARPBP-008 102120195-102196368 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000327680ENST00000392909ENST00000392911ENST00000417507ENST00000457614ENST00000541394ENST00000541668ENST00000543784
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000327680 0.322±0.00 1.815±1.80 0.112±0.00 N/A 0.723±0.68
ENST00000392909 N/A N/A N/A N/A 1.114±0.45
ENST00000392911 N/A 1.116±0.46 N/A 1.454±0.00 0.596±0.22
ENST00000417507 N/A 1.662±0.00 N/A N/A 0.701±0.34
ENST00000457614 N/A 0.408±0.00 N/A N/A N/A
ENST00000541394 N/A N/A N/A N/A 0.631±0.10
ENST00000541668 N/A N/A N/A N/A 0.495±0.45
ENST00000543784 N/A 1.792±0.37 N/A N/A 1.372±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006281 IEA DNA repair
GO:2000042 IMP negative regulation of double-strand break repair via homologous recombination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029944 parpbp protein_coding Danio_rerio
ENSMUSG00000035365 Parpbp protein_coding Mus_musculus

Loading