ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: zinc finger protein 546
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187187 ZNF546 9606 + 19:39984134-40017607 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000347077 ZNF546-001 39997076-40017607 protein_coding
  ENST00000593687 ZNF546-006 39997038-39999830 retained_intron
  ENST00000595225 ZNF546-008 39997236-40008545 protein_coding
  ENST00000596894 ZNF546-009 39997036-40016809 protein_coding
  ENST00000597363 ZNF546-007 39984134-39998303 processed_transcript
  ENST00000599504 ZNF546-005 39997036-40013803 protein_coding
  ENST00000600094 ZNF546-002 39997063-40016545 protein_coding
  ENST00000601138 ZNF546-004 39997060-40011348 protein_coding
  ENST00000602253 ZNF546-003 39997120-39998550 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000347077ENST00000593687ENST00000596894ENST00000597363ENST00000599504ENST00000600094ENST00000601138ENST00000602253
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000347077 N/A 0.179±0.13 N/A 0.102±0.06
ENST00000593687 0.595±0.00 0.572±0.23 N/A 0.708±0.10
ENST00000596894 0.697±0.00 0.556±0.00 N/A N/A
ENST00000597363 0.436±0.00 N/A N/A N/A
ENST00000599504 N/A N/A N/A 0.313±0.07
ENST00000600094 0.027±0.00 0.198±0.09 0.387±0.00 0.273±0.17
ENST00000601138 N/A 1.095±0.37 N/A 0.670±0.39
ENST00000602253 N/A N/A N/A 0.762±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003UL CIL_0003UL_0003 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075470 zgc:110238 protein_coding Danio_rerio
ENSDARG00000075834 si:dkey-182i3.8 protein_coding Danio_rerio
ENSDARG00000086182 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000086720 zgc:173603 protein_coding Danio_rerio
ENSDARG00000087249 si:dkey-7i4.17 protein_coding Danio_rerio
ENSDARG00000088378 si:dkeyp-4f2.4 protein_coding Danio_rerio
ENSDARG00000090400 CR388363.1 protein_coding Danio_rerio
ENSDARG00000091524 si:ch211-162i8.3 protein_coding Danio_rerio
ENSDARG00000091793 CABZ01071911.2 protein_coding Danio_rerio
ENSDARG00000092000 si:ch211-286l10.1 protein_coding Danio_rerio
ENSDARG00000093143 si:dkey-77f5.5 protein_coding Danio_rerio
ENSDARG00000094175 si:dkey-29p23.3 protein_coding Danio_rerio
ENSDARG00000094459 si:dkey-16p19.10 protein_coding Danio_rerio
ENSDARG00000095440 si:dkeyp-53e4.2 protein_coding Danio_rerio
ENSDARG00000095708 si:dkey-77f5.16 protein_coding Danio_rerio

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