Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_genes' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_model_ cache was unable to write 'default_angiogenes_genes' to File cache [CORE/Cake/Cache/Cache.php, line 323]
ANGIOGENES

ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SKI family transcriptional corepressor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188779 SKOR1 9606 + 15:67819704-67834561 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341418 SKOR1-001 67819704-67834561 protein_coding
  ENST00000380035 SKOR1-003 67825545-67834555 protein_coding
  ENST00000554054 SKOR1-004 67825516-67834555 protein_coding
  ENST00000554240 SKOR1-002 67823557-67834538 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000341418ENST00000380035ENST00000554054ENST00000554240
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000341418 0.059±0.00 0.036±0.02 N/A 0.030±0.02
ENST00000380035 N/A N/A N/A 0.070±0.03
ENST00000554054 N/A N/A N/A 0.009±0.01
ENST00000554240 0.144±0.00 0.164±0.05 0.935±0.00 0.016±0.01

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008DX CIL_0008DX_0001 VISTA
CIL_00098T CIL_00098T_0001 VISTA
CIL_0008FO CIL_0008FO_0001 VISTA
CIL_0004L4 CIL_0004L4_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IBA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IEA transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005634 NAS:IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0005737 IBA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0030425 IDA dendrite
GO:0030512 IBA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0043025 IDA neuronal cell body
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0046332 IPI:IEA SMAD binding
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062448 skor1b protein_coding Danio_rerio
ENSDARG00000069030 skor1a protein_coding Danio_rerio
ENSMUSG00000022245 Skor1 protein_coding Mus_musculus

Loading

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]
Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]